| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0208 |
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| Symbol | |
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| ID | 5537669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 256814 |
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| End bp | 258535 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640892371 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430359 |
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| Protein GI | 156740230 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.212991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.715673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAGAA CATCTGTAGG ACGTTTTTCT CTTGCACGCT ACTGGCCAGA GGTGGTCGCA
TTCGTGATAC CTCTACTCGT TGCCAGTGCA TTGCTTTTTG GATATGTTGG ACCACTCAAC
GGGTTCTGGT CTACCGATCA GGGGGTGAAG CTGATTCAGG TGCAGAGCCT TCTGTTGAAC
AAATTCAGCA GTAGTGCGCT GATCTACCCC GGTGCGGCGA TCGATCAGGA TGACAGGGTC
AGTCCGTTAC GAGGGCAATA TTATCAGCAC GGCGGGCAGA CCTATGCAAT GTTCTCGGAC
GCCTTCGCTC TGATCAGCAG CGTTCCCTTC TTTTTCTTTG GGTTTGCCGG GTTATACCTG
GTTCCACTGG TTTCTCTCGC TGCGCTGTCT TTGATCTGCA CTTGCATCGC TCGTCCGTTG
CTTGGTCCGG GAGGGGCGTT GCTCTCGGCT CTGGCGCTGA CGTTGACATC GCCTTTGTTG
TTTTACAGCG TTATTTTCTG GGAACATCTG CCAGCGATGT TGCTGACAAC CCTTGCTCTC
TGGCAGTCGT TGGAAGGGTA TCATCGCAAT GAGCGGCGCC GGTTCTTTGG CGCCGGCATC
GCTATTGGCG CCGCAGCGTG GTTGCGCAAC GAAGCCATAC TGGCAGCGCC GGCACTGATC
GGTGCGGTTC TGCTTACACG GCGCTCGCAG TCGTTGCAAA CTGCTGCCTG GATCGGCATC
GGTGCGGGTG CTGGAGTGTT GCCCTTGTTG CTCTACAACC AGATCGTGTT TGGCGCGGCG
GTCGGTCCGC ATGTGCTGGT TGCGGGAGCG GCACAATATC GGGGAGCGAG TGATCCATTG
ATGATGCGCA TAGAATGGGC TGATCGCCTG CTTGTACCAC TTGATGAACC GGTTCTGGCG
GGCTTGGTGA TTGTACTGGT CATAGTCTCC ATTATCACGG CGATATGGCG TGCGCGCAGC
GCGGCGAATG TCGGCTTCGC GCTCGCCATT GTCGTGACGA TTGTGATCGC AGCTGCCATT
CAACGAGCGC CGCGCGGCGG GTTGCAAACA ACGCTGCTGA TGACATTTCC GGCAGTACTG
CTGTGTTGCT TCCCGGTTGC CCCGAAGGAG CGATTAGATC GTGTTGACAC ACCTTTGATC
CTGACCGCAT TTGGGTTGAC GTTTATCGCG CTGGCCTGGC TGGCGCTGCT GCCTGATGGT
GGTGCGCAGT GGGGTCCACG CATGCTTTTG CCGGCGGCGC CGGCGCTGAC AATCGCAGGC
TTCTGGCGCG CAGGGTCATG GCTTCGCCGC CCTGCTGCTG GCGCTGCGGT TGCGGGCGTG
AGCGCCATTG TCCTCTTTGT CGCCATGTTG TCGCAATGTG CGGGATTGCG CCAGTTGCGC
GATTTCAATA CGGCGAACCA TACCTTGCTC ACAACAGTCG CGCAGAGCGG AGCATCAGCG
ATTATCACCG ATACGTGGTA CGGTCCGCCG CTGCTGGCGC CGATCTTCTA TGACGAACGC
ATGATTTTTC TGGTTGATGA TGGCGCCGAT CTTGATTACC TTATCGAGCG GTTGAGCAAC
GCAGGGTTCG ATACGGTCTA CTATTTGAGC GGGCGGCGTG ATGAAATTAC TTCCGATGCT
CGACGATGGC GCGAACTGAC ACCGATCGGA GCGCCGGCTC GATTGGCGCA TCATCTTACC
GGACAACTGT ACCAGATCAA TACGCCTCCA CCATCAGACT GA
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| Protein sequence | MGRTSVGRFS LARYWPEVVA FVIPLLVASA LLFGYVGPLN GFWSTDQGVK LIQVQSLLLN
KFSSSALIYP GAAIDQDDRV SPLRGQYYQH GGQTYAMFSD AFALISSVPF FFFGFAGLYL
VPLVSLAALS LICTCIARPL LGPGGALLSA LALTLTSPLL FYSVIFWEHL PAMLLTTLAL
WQSLEGYHRN ERRRFFGAGI AIGAAAWLRN EAILAAPALI GAVLLTRRSQ SLQTAAWIGI
GAGAGVLPLL LYNQIVFGAA VGPHVLVAGA AQYRGASDPL MMRIEWADRL LVPLDEPVLA
GLVIVLVIVS IITAIWRARS AANVGFALAI VVTIVIAAAI QRAPRGGLQT TLLMTFPAVL
LCCFPVAPKE RLDRVDTPLI LTAFGLTFIA LAWLALLPDG GAQWGPRMLL PAAPALTIAG
FWRAGSWLRR PAAGAAVAGV SAIVLFVAML SQCAGLRQLR DFNTANHTLL TTVAQSGASA
IITDTWYGPP LLAPIFYDER MIFLVDDGAD LDYLIERLSN AGFDTVYYLS GRRDEITSDA
RRWRELTPIG APARLAHHLT GQLYQINTPP PSD
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