| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0199 |
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| Symbol | |
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| ID | 5537660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 242429 |
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| End bp | 243553 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640892362 |
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| Product | nuclease |
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| Protein accession | YP_001430350 |
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| Protein GI | 156740221 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.565023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTC CATCGCCAAA ACGTCGTCAG CGTTCCTCCC GGCAACGCCG GGAGGGATGG
TTTCAGCGCG CCTGGCGCTT CTGGATGAAC GATATTCGTT CTCGTCGTTC GTGTCTGGGG
CGAGCGCTGT CGGTGACCGC TGGCGTCATC ATCATCATCG CTCTGGTCCT GATCGTTGTT
GGGTTCATCT CTGCCCGCAG CGACCTGTTC CTGTCCCCTG AAACCACATC ATCGCGCCCA
TTGCCCGATG CGCCGACATC TGCGCCGGTT CCGCTTCCGC CGTCGCCGAC ATCCCTCATC
CTACCGGAAG GACTGGATCG CGCAATTGTC ACCAATGTCA CCGACGGCGA CACGATCGAG
GTGTCGTTTG GCGGGGTGAC CGAACGAGTG CGACTGATCG GCGTCGATAC GCCGGAGACG
TCGCATCCGT CGCGTCCGGT CGAATGTTTT GGGCGCGAGG CGGCGGCGTT CACCCGCGCG
ATGTTGAGCG GTCAGACGGT GGTGCTCGAG GCAGATCCCA CCCAGGATAA TCGCGACCGG
TTCAATCGGT TGCTCCGCTT CGTCTGGTTG CCGGACGGTC GTCTGGCAAA CTACGAGATC
ATTGCGCAGG GATACGGCTT CGAATACACC TTCCGAACGC CGTATCGTTA TCGCGCAGAG
TTCAGGGCGG CAGAGCGCGC CGCGCGCGAG GCGCAAGCAG GGTTGTGGGC GCCGGAGACG
TGCAACGGCG AACGTGTTCC GGCAGGCAGC GCCACGCCAA TCGCCCGCCC GTCTCCAACG
CCGTTATCGG TTGCAACGCC GCTGCCGCCG TCGTTCGACG GATGCCGCAC CGAACCGAAT
GCCGCGCGCG CGCCGAACGC GCCGGTCGTC ATCGTCAGCA TCGACAAGCG CGCCGAAATC
GTCACACTGC GCAATCTCAG CAGCGAGCCG GTGAGTCTGG ATGGTTGGAC GATGTGCAGC
ATGCGCGGCG CGCAAGTTCA CCAGGGCATT GGCGGCGTCC TGGCGCCAGG CGAAACACGT
TCGTTCCCAC GCGCAGGCGG CAGAGACATC TGGACCGACA ACACCTCCGA TCCGGGCGCG
CTGTACGACG CGGAAGGTCG GCTCGTCGCC TACTGGAATG ACTGA
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| Protein sequence | MSRPSPKRRQ RSSRQRREGW FQRAWRFWMN DIRSRRSCLG RALSVTAGVI IIIALVLIVV
GFISARSDLF LSPETTSSRP LPDAPTSAPV PLPPSPTSLI LPEGLDRAIV TNVTDGDTIE
VSFGGVTERV RLIGVDTPET SHPSRPVECF GREAAAFTRA MLSGQTVVLE ADPTQDNRDR
FNRLLRFVWL PDGRLANYEI IAQGYGFEYT FRTPYRYRAE FRAAERAARE AQAGLWAPET
CNGERVPAGS ATPIARPSPT PLSVATPLPP SFDGCRTEPN AARAPNAPVV IVSIDKRAEI
VTLRNLSSEP VSLDGWTMCS MRGAQVHQGI GGVLAPGETR SFPRAGGRDI WTDNTSDPGA
LYDAEGRLVA YWND
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