Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0139 |
Symbol | |
ID | 5537599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 167869 |
End bp | 168828 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640892303 |
Product | glycosyl transferase family protein |
Protein accession | YP_001430292 |
Protein GI | 156740163 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.412068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAACA GCAGCACAAA ATATAATCTC AATATTGAGA TCATCGTTCT GCATTGGCGT GACGACCAAC GCACGCGCCA ATGCCTTGCA GCGCTGCAAA CGCTCGATTA TCCCGCCCAC TCCATTACAC TGGTCGATAA TGGATCACAC AATGGCTCTC TTGAGCGGTT AATCGTTCAA TTTCCCGACA TCCCCATCAT TCGGCATCAA GAAAACCGGG GCTTCGCCGG AGGCGTCAAT CCCGCAATTC GTCGCGCGCT GGCAGAAGAA AATATCGACG CCATTCTGCT TCTCAACAAC GATGCCCTCC TTGCACCCGA CGCACTGTGG CGACTGGTAC AGGCGATGGA ACAGTATCCG CATATCGGCA TTCTGAGCGC AGCGGTTGTT CGCGCCGATC AACCAACCCT GATGGCGGGT GCGGGCGCTT TTGTCGGTCA ATACTGGACC ACGCCAGTCG GTTGGAATGA GCCGCTTGCA CCGCTGCCAC CCGATGTTCC GGTGTCGGTA CATACCGTCT TCGGATGCGC CATGCTTGTT CGCCGTGCAG TATTTGAGCG GATCGGACTG TTTGACGAAC GGTACTTTTT CTACTACGAA GATACCGATT TCTGCCTGCG GGCGCGATCT GCCGGGTTTG AAGTCGCCTA TCTTCCTGGC GCTATCGCCT ATCACACTGT ATCTGCCAGC ACACGGAATG TGCCAGGTCT GCGCGAGTTC TACCTGGCGC GCAGTCGCCA GATTTTCTTT CGCAAGAGAC GATCCGGTAT CGAATATCTG CTATACTTAC TCGTCGCCAT AGTTCATCTG GCGCGTGTTG CGCGCTGGAA AGTGCAACGT GCACATTGGA GCGATGCAGT CGGGTATGTT GCTGGCGGTC TGGTAGGATT GATGATGCCA ATGGAGCATA AGTGCGAGCC GCAGATCACA CGTGAGGGAG AGCATCCATG GAAAGCGTAG
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Protein sequence | MGNSSTKYNL NIEIIVLHWR DDQRTRQCLA ALQTLDYPAH SITLVDNGSH NGSLERLIVQ FPDIPIIRHQ ENRGFAGGVN PAIRRALAEE NIDAILLLNN DALLAPDALW RLVQAMEQYP HIGILSAAVV RADQPTLMAG AGAFVGQYWT TPVGWNEPLA PLPPDVPVSV HTVFGCAMLV RRAVFERIGL FDERYFFYYE DTDFCLRARS AGFEVAYLPG AIAYHTVSAS TRNVPGLREF YLARSRQIFF RKRRSGIEYL LYLLVAIVHL ARVARWKVQR AHWSDAVGYV AGGLVGLMMP MEHKCEPQIT REGEHPWKA
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