| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0135 |
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| Symbol | |
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| ID | 5537595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 162982 |
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| End bp | 165153 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640892299 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001430288 |
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| Protein GI | 156740159 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.234448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACTC AGGAATTGAT TGCTCAACTG CGCACCCGTC CTGGGGTGCT TGCCGTTCAT
TATGACGAAC AGGAAGGTGT GCTGACGCTG CGCTACGATG GCGGTCGCGT GAATGTCGCC
GATATTGAGG CGCTTGCCCG CAACGCCGGC GCAACGCTGC GCATGCTGCC TGCCGAAACC
CGTCCACTGA CGCCGGAAGA GGCGGAACTT GCAGCGCTGC CCTGGATGAT CCGCCTGACA
ACGCTCACTC TGGTGATGGT CGTTGCCGGA TGGATCGTCG AAGACTTCAT GGCGCTGCCG
CGCTGGGTCG CCTGGCTGCT CTACGCCGTC GCGTATGCGA GCGGCGGGTT CTATAGCGTC
CAGGAGGCGT GGGAAACGCT CAAGAAGCGG CAGTTCGATG TCAACTTTCT GATGATCGTG
GCTGCCGTCG GCGCGGCGAT TGTCGGTCAA CCGCGCGAAG GCGCCATTCT GATGTTTCTG
TTTTCGCTTT CCGGTACGCT CGAAACATAT GCGATGGGGC GCACGCATGC TTCGATTCGC
GCCCTCCTCG ATATGACGCC GAAAGAGGCG GAGGTGTACC GCAATGGCAC GCTTGTGCGT
GTGCCGGTCG AGGAATTGCA GGTCGGCGAG GTGGTGTTGG TGCGCCCCGG TGCGCAGGTC
CCCGCCGATG GCGTGGTGGT GCGCGGTGAG TCGGCGCTGA ACGAAGCCTC GATTACCGGC
GAGTCGATGC CGGTCGAGAA ACGCCCCGGC GCAAAAGTGT TCGCCGGCAC GATGAACGGG
CAGGGGGCGC TCGAAGTGCG TGTGACCACC TCGGTGGAAA ACTCGACGCT GGCGCGGATT
GTGCAGGTGG TGCGCGAAGC GCGGGAACAG AAGGCGAAGA GCCAGGATTT CACCGACCGG
GTCATTGGTC AATACTACGC TTATGCGGTC GTCGGTCTGA CGCTGCTGGC GATTATCATT
CCGCTCCTCT TTCTGGGATG GGATCCGGGC ACGACCCTTT ATCGTGCGAT GACGCTGATG
GTGGTGGCAT CGCCGTGCGC GCTGGTCATT TCGATCCCGG CGGCGCTCCT CTCGGCGCTG
GCGGCGTCGG CGCGCGGCGG GGTGCTCTTC AAGGGCGGAC GTCACCTGGA AGCCGCTGCG
CAGGTGCGGG TTGTGGCGTT CGATAAAACC GGCACACTGA CGACCGGCAG ACCTGGGGTG
GTGGCAGTGA TTCCGGTGGA TGGCGCAGCC GCAGAACTGG AACACGCGCT CGCCGAAGCG
GAAGCGCCAT CCCGTTCGCC GCAACCGATC CCCGATGATA TGATCGGGCC GCTCTCGACC
GACCAGCGAC GCCTGCTGGC GCTGGCAGCC GCTATTGAGC GCCCTTCGGA GCATCCGCTG
GCACGCGCGA TTGTGCGCGG CGCCGATGAA CGCGGTCTGC CGACACCGGT CGCAACCGGC
TTTGAGTCGC TGACCGGCGC CGGCGCGGCT GCGAACATCA ATGGTTGCCG GTTGACGATT
GGGCGTCCGT CGCTGTTCGA CCTGACGCCG GAGGTTGCGG CGCAGATTGC GGCGCAGCAG
GACCTGGGAC GCACTGTGGT GGCGCTCGGA TGCGAACGCG CCGTCTGGGG CATTATCGCC
ATTGCCGATA CGGTGCGCCC CGAAGCGGCT GCGGCGGTTG CGCGCTTGAA GCAGACCGGT
ATCGAGCGGG TAGTGCTGCT GACCGGCGAC AATCAGCGGG TGGCGCAGAC GCTTGGGCAG
GCGCTCGGTG TTGACGAGGT GCGCGCCGAA CTGTTGCCGG AAGAGAAAGT CGCCGTGCTG
CGTGAACTCG AGGAGCGGTA TGGACCGGTG GCGATGGTCG GCGATGGCAT CAATGATGCG
CCGGCGCTGG CGAGTGCGAC GCTCGGCGTG GCGATGGGGG CGGCAGGCAC GGACGTCGCG
CTGGAGAGCG CCGATGTGTT GCTCATGAGT GACGATCTGA GCCGCCTGCC GGGGGCGTTG
CGCCTGGCGC GTCGCGCGCG CAGCATCGTG CGGCAGAACC TGGCGTTCGC CTTTACCGTT
ATGGCAGTGC TGATGGTGTT CGCCATATTC GGCGCCATTC CGCTGCCGCT TGGCGTTGTC
GGGCACGAAG GCAGCACCCT GATCGTGGTG GCGAACGGTC TGCGGTTGCT GGCGGAGCGG
ACGTCATCAT AA
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| Protein sequence | MSTQELIAQL RTRPGVLAVH YDEQEGVLTL RYDGGRVNVA DIEALARNAG ATLRMLPAET
RPLTPEEAEL AALPWMIRLT TLTLVMVVAG WIVEDFMALP RWVAWLLYAV AYASGGFYSV
QEAWETLKKR QFDVNFLMIV AAVGAAIVGQ PREGAILMFL FSLSGTLETY AMGRTHASIR
ALLDMTPKEA EVYRNGTLVR VPVEELQVGE VVLVRPGAQV PADGVVVRGE SALNEASITG
ESMPVEKRPG AKVFAGTMNG QGALEVRVTT SVENSTLARI VQVVREAREQ KAKSQDFTDR
VIGQYYAYAV VGLTLLAIII PLLFLGWDPG TTLYRAMTLM VVASPCALVI SIPAALLSAL
AASARGGVLF KGGRHLEAAA QVRVVAFDKT GTLTTGRPGV VAVIPVDGAA AELEHALAEA
EAPSRSPQPI PDDMIGPLST DQRRLLALAA AIERPSEHPL ARAIVRGADE RGLPTPVATG
FESLTGAGAA ANINGCRLTI GRPSLFDLTP EVAAQIAAQQ DLGRTVVALG CERAVWGIIA
IADTVRPEAA AAVARLKQTG IERVVLLTGD NQRVAQTLGQ ALGVDEVRAE LLPEEKVAVL
RELEERYGPV AMVGDGINDA PALASATLGV AMGAAGTDVA LESADVLLMS DDLSRLPGAL
RLARRARSIV RQNLAFAFTV MAVLMVFAIF GAIPLPLGVV GHEGSTLIVV ANGLRLLAER
TSS
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