| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0102 |
|---|
| Symbol | |
|---|
| ID | 5537561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 122743 |
|---|
| End bp | 123090 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640892266 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001430256 |
|---|
| Protein GI | 156740127 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3502] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAA GGATTATCTT CCATATGGCG CCGGCTGAAC GTTGGACGAT GTGGCCCGCG
CACGAACCCT ATGTTCCGGC AGAGTTTGCG GTGGATGGGT TCGTGCACTG CACCGAGGGC
GAAGAACTGA TGGTGCGCGT CGCCAATGCG CTGTATCGTG GGACGCCGGG CGATTTTGTG
CTGCTGGTCA TCGATGTCGA ACGGTTGACC GTGCCAGTGC GCTGGGAGCG TCCTGCTGGC
ACACCCCTGG CGCCGCTCTT CCCTCACATC TACGGACCGA TCAACCCAGA GGCGATTGTC
GAGGTGCGGC GTATCGAGCG CGACGTTGAC GGTGCATTTC TGCTATAA
|
|---|
| Protein sequence | MSARIIFHMA PAERWTMWPA HEPYVPAEFA VDGFVHCTEG EELMVRVANA LYRGTPGDFV
LLVIDVERLT VPVRWERPAG TPLAPLFPHI YGPINPEAIV EVRRIERDVD GAFLL
|
|---|
| |