Gene Rcas_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0074 
Symboleno 
ID5537533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp91462 
End bp92751 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content62% 
IMG OID640892239 
Productphosphopyruvate hydratase 
Protein accessionYP_001430229 
Protein GI156740100 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00475517 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000106415 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCCGACA CGACGATTGA AGCGATTACC GCGCGTGAAG TGCTCGACTC GCGTGGTAAT 
CCGACGATTG AGGTGGACGT GTATCTGGAG AGTGGCGACA TGGGGCGCGC TATTGTGCCA
TCGGGTGCAT CGACCGGTGC ATTCGAGGCG CTGGAACTGC GCGACGGCGA CAAGAGTCGG
TATGGCGGCA AGGGCGTGCT GAAAGCCGTT GAGAACGTGA ACACCACGAT TGCCGAGGCG
CTTGAAGGGG AAGATGCCGC CGATCAGATG CGCATCGACC GGATGCTGAT CGACCTCGAC
GGCGCCGAGA ACAAAGGGCG GTTGGGCGCC AACGCCATTC TGGGGGTTTC GCTGGCGTGC
GCGAAAGCGG CGGCAGCAGC GCACGGGTTG CCGTTGTACC GCTACCTGGG AGGCATCCAT
GCGCACGTGC TCCCTGTTCC TATGATGAAC ATTCTGAACG GCGGCAAACA CGCGCAAAAC
AGCACCGACT TCCAGGAATT CATGATCATG CCGGTTGGTG CGCCATCGTT CCGCGAGGCG
CTGCGCTGGG GGAGCGAAAT CTACCAGAGC CTCAAGAAAG TGATCCACGA CCGTGGCGGC
AGCACCAACG TCGGCGACGA GGGCGGCTTC GCGCCGAGTC TGCCGACGAA CGAAGCAGCC
TTGCAGATCA TTGTCGAAGC CGTGGAACGC GCCGGTTACC AACTCGGCGA CCAGGTGATG
CTGGCGATGG ACCCCGCATG CACCGAACTG TACAAAGACG GCAAGTACCA CCTGGAGCGC
GAAGGGCGCT CCCTCACCAG CGCCGAAATG GTGGAGTACT GGGCGGACAT TGCCGCGCGC
TACCCGCTCA TCTCGCTCGA AGATGGGCTT GCGGAAGAAG ACTGGGAAGG TTGGAAACTG
TTGCGCGCGC GGCTCGGCGA TCGCATTCAA CTGGTCGGCG ACGATTTCCT GGTGACAAAC
GTGAAGCGAC TGGCGCGCGC CATCTCCGAA CAGGCAGCGA ATTCGATCCT GATCAAACTC
AATCAGATCG GCACGCTGAC CGAAACACTC GATGCGATCA CCATGGCGAA CCGCGCCGGA
TGGACGGCGG TTGTCTCGCA TCGTTCGGGT GAAAGCGAAG ATGTGACGAT TGCCGATCTC
GTGGTGGCGA CGAATGCCGG GCAGATCAAG ACTGGCGCGC CGGCGCGCAC GGATCGCGTG
GCGAAGTACA ATCAACTGCT GCGCATTGAA GAAGAACTGG ACTCCGCAGC GCACTACGCG
GGCATGGGCG CCTTCCGCGT TGCGCGGTGA
 
Protein sequence
MADTTIEAIT AREVLDSRGN PTIEVDVYLE SGDMGRAIVP SGASTGAFEA LELRDGDKSR 
YGGKGVLKAV ENVNTTIAEA LEGEDAADQM RIDRMLIDLD GAENKGRLGA NAILGVSLAC
AKAAAAAHGL PLYRYLGGIH AHVLPVPMMN ILNGGKHAQN STDFQEFMIM PVGAPSFREA
LRWGSEIYQS LKKVIHDRGG STNVGDEGGF APSLPTNEAA LQIIVEAVER AGYQLGDQVM
LAMDPACTEL YKDGKYHLER EGRSLTSAEM VEYWADIAAR YPLISLEDGL AEEDWEGWKL
LRARLGDRIQ LVGDDFLVTN VKRLARAISE QAANSILIKL NQIGTLTETL DAITMANRAG
WTAVVSHRSG ESEDVTIADL VVATNAGQIK TGAPARTDRV AKYNQLLRIE EELDSAAHYA
GMGAFRVAR