Gene Rcas_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0054 
Symbol 
ID5537512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp68332 
End bp69099 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content62% 
IMG OID640892219 
Productinositol monophosphatase 
Protein accessionYP_001430210 
Protein GI156740081 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.56898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC TATCTTTTGC TATTGAAACC GCACGATGCG CCGGCGCACT CCTGCTCGAC 
GGGCTTGCAC GCCGCCGCAC GATGGAATTG AAGAGCGCCT ACGAAGTCGT GACCGAAATA
GACCGGGACA GTGAGGCATT GATCGTCGCT GCTATCCGCC GCACCTTCCC CGATCATGCC
ATTCTTGCCG AGGAAGGAGG ACGGGTGGAG CGGGAGTCGC CCTTCCTCTG GCTCATCGAT
CCACTCGATG GCACGAACAA TTATGCGCAC GGGTTTCCTT TTTTTTCGAT TTCCATCGCT
TTGATGGAGA ACGATACGCT CCTCCTCGGC GTGGTGTTCG ATCCGTTGCG AAACGAACTC
TTCTCTGCCG AACGCGGCGC GGGGGCATGG TGCAACGAGC AGCGCCTGCG CGTGTCCGCA
ACGCCAACCC TCGCATCATC GCTGGTCTCG ACAGGGTTCC CCTACGATTA TGCGACAACC
GCCGACAACA ACACCCGGCA ATTCACCCGC CTCCAGGCGC GCACGCAGGG GGTTCGGCGC
GCCGGCTCTG CGGCGCTCGA CCTGGCATAT GTGGCAGCGG GGCGGCTCGA TGCACACTGG
GAGCTGCGCC TGAAACCGTG GGATACGGCG GCTGGCGCGT TACTCGTGCT GGAAGCCGGC
GGGCGCCTGT CCGATTGGCG TGGAGCGCCC TGGAATCCCT GGAACGACCG ACTGGTTGCA
TCCAATGGTC GCATCCACGA TGAGTTGATC GCGGCGCTTG CCGAATAG
 
Protein sequence
MTMLSFAIET ARCAGALLLD GLARRRTMEL KSAYEVVTEI DRDSEALIVA AIRRTFPDHA 
ILAEEGGRVE RESPFLWLID PLDGTNNYAH GFPFFSISIA LMENDTLLLG VVFDPLRNEL
FSAERGAGAW CNEQRLRVSA TPTLASSLVS TGFPYDYATT ADNNTRQFTR LQARTQGVRR
AGSAALDLAY VAAGRLDAHW ELRLKPWDTA AGALLVLEAG GRLSDWRGAP WNPWNDRLVA
SNGRIHDELI AALAE