Gene Rcas_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0033 
Symbol 
ID5537491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp45982 
End bp46341 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content55% 
IMG OID640892199 
Productroadblock/LC7 family protein 
Protein accessionYP_001430190 
Protein GI156740061 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCA ATATGCGCCG GATCGTTGAA GACCTCATCC GGGTGGAAGG GGTCATCGGG 
AGTTTACTCG TCGGAAAGGA TGGTCTGGTC GTTGCCAGTA CGCTGATGGA TGAGGAAGAT
GCCGAGATTC TGGGAGCCAT GTCGGCTGCC GTATTTGGCG AAATTGACAA AGCAACCAGG
CGGATCGGCG TCGGCGCGCT GATCGATTCG ATCATCGATG CGGAGCAGGG TTCCATTCTC
ATGCTCGAAG CGCGGGAGTT GATCCTGGTT GTTATCACGC AGCGCATGGT CAATCTTGGT
CTGGTCAAGA TGGAAATGCG CCGGGCATCC AAGCGCATCA GTGAAGCTGT TCCAATCTAA
 
Protein sequence
MTVNMRRIVE DLIRVEGVIG SLLVGKDGLV VASTLMDEED AEILGAMSAA VFGEIDKATR 
RIGVGALIDS IIDAEQGSIL MLEARELILV VITQRMVNLG LVKMEMRRAS KRISEAVPI