| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0017 |
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| Symbol | |
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| ID | 5537474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 17324 |
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| End bp | 18325 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892182 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001430174 |
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| Protein GI | 156740045 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000233702 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCAAA TCCTCCTGAT TTTCATTACT GCCCTGCTCT TTTCGGTGTT GGCGACGCCG
GTAGCGCGGC GGGTGGCATT GCGCACCGGC GTGGTCGATG CGCCGGCGGC ACGCAAACTG
CACCTCGCGC CGGTGCCGCT GCTCGGCGGC GGCGCGATCT ACACAGCGTT TGTCGTGGCG
CTCATCCTGT TTGGCGATCA GGCATATGTG CGTGAGTTGA TCGGCATTCT GCTCGGCGCT
ACGCTGGTCT CGCTCTTTGG TCTTGCCGAT GACCGCTGGG GATTGAACGC CTATGTGAAA
CTTGGCGCTC AGGCGCTGGC GGGTGCGATC CTGATCCTTG GCGGAACCCA GGTGCGTCTC
TTCCCGGTTG AATGGATGAA CTGGGCGATA ACACTGTTCT GGGTAGTAGG TATCACGAAT
GCGCTCAATC TGCTCGACAA TATGGATGGG CTTTCGGCAG GAGTGACGAC GGTTGCTGCC
GCTTATTTCC TGCTCCTGGC TGCGATGAGC GGACAATACC TGGTCGGAGC GATGGCTGCT
GCGCTGATCG GTGCGTGTGT TGGCTTTCTG CGCTACAATC TCAACCCGGC GACGATTTTC
ATGGGTGATG CCGGTTCGCT CTTCCTGGGG TTTCTCCTGG CGGCGCTGGC GATCAAATTG
CGCTTCCCGT CCAATGTTCC ATGGGTGACA TGGCTGGTGC CGGTGTGTGT CCTGGCAGTG
CCGATCTTCG ACACGTCACT GGTTTTCGTC TCTCGTCTCC GCCGGGGCAA AAACCCATTG
ACCACACCGG GGAAGGATCA TGTATCGCAC CGCCTCACTG CCCTCGGTCT GACTCGTCGT
GAAGCGGTGC TGATCTGTTA CCTGCTGGGA TGCGGCGCGG GAATGGTGGC GGTGTACATC
TCGCAGGCGC GCGCGCCTGA TGGGTATGTT GCCGCAGGAT TGCTCGCTGC GGCAATGCTG
GCGGGAATCG TCTGGTTCGA GCGACGTCAG GGCGGGGGAT AG
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| Protein sequence | MTQILLIFIT ALLFSVLATP VARRVALRTG VVDAPAARKL HLAPVPLLGG GAIYTAFVVA
LILFGDQAYV RELIGILLGA TLVSLFGLAD DRWGLNAYVK LGAQALAGAI LILGGTQVRL
FPVEWMNWAI TLFWVVGITN ALNLLDNMDG LSAGVTTVAA AYFLLLAAMS GQYLVGAMAA
ALIGACVGFL RYNLNPATIF MGDAGSLFLG FLLAALAIKL RFPSNVPWVT WLVPVCVLAV
PIFDTSLVFV SRLRRGKNPL TTPGKDHVSH RLTALGLTRR EAVLICYLLG CGAGMVAVYI
SQARAPDGYV AAGLLAAAML AGIVWFERRQ GGG
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