Gene Rcas_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0011 
Symbol 
ID5537468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp9480 
End bp9875 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content61% 
IMG OID640892176 
Productdeath-on-curing family protein 
Protein accessionYP_001430168 
Protein GI156740039 
COG category[R] General function prediction only 
COG ID[COG3654] Prophage maintenance system killer protein 
TIGRFAM ID[TIGR01550] death-on-curing family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00205829 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000011369 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCAGT ATCTGACAAC AGACGATGTG CTGGACCTGC ATACGTATGC GGTTTTGCGG 
TATGGGGGGC GTCTGGGGAT CGCCAGTCAC GACCGGTTGA TGTCGGTGGT GACGGCGCCG
CGCCAGGTGC TCTTCGAGGC TGAGTTGTAC CCTGATGTGC CGAGCAAGGC TGCGGCGTTG
ATGTTTCTGA TGATCAAGAG CCGCCCCTTC GTCAGCGCCA ACGAGTCGAC GGCGCTGCTC
TGTATGCTGC GTTTTCTTGC CCTCAATGAA GCATCGCTAC GCAACGACGT GGCGGAGGCG
GAATTGCTCT GGCTGGTGCG CTCCGTTTCC AACTCCGACC TGGATCGCGG CGGGGTCGAG
CACTGGCTGC GTCAGCGCCT GGATCACTCG GCATAA
 
Protein sequence
MIQYLTTDDV LDLHTYAVLR YGGRLGIASH DRLMSVVTAP RQVLFEAELY PDVPSKAAAL 
MFLMIKSRPF VSANESTALL CMLRFLALNE ASLRNDVAEA ELLWLVRSVS NSDLDRGGVE
HWLRQRLDHS A