Gene Rcas_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0010 
Symbol 
ID5537467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp9035 
End bp9283 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content57% 
IMG OID640892175 
Producthypothetical protein 
Protein accessionYP_001430167 
Protein GI156740038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000388951 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000010836 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGGTC CCACGGGCAT GGGGGAGGAA GCATTGCCAC GATCGTTTAC CATCGAACGG 
GAGAATTTGC CCGAAACTGT GCAGGGCTGG CTACGCGCCG TCGGGCTTGG CGACGAGGAA
CTGGTCGAAC TGATCTTTAC GGAGAACGAG GTGTTGCTGC GTCGCCCGAT GAGTCCGCAG
TTGCGTGAAT GGGCGCGTGG TGTGAGCGAT AAGTACGATA AAATGTTTCG TGAACTGGCG
GGAATCTGA
 
Protein sequence
MNGPTGMGEE ALPRSFTIER ENLPETVQGW LRAVGLGDEE LVELIFTENE VLLRRPMSPQ 
LREWARGVSD KYDKMFRELA GI