| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0006 |
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| Symbol | |
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| ID | 5537463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4259 |
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| End bp | 4687 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640892171 |
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| Product | histidine triad (HIT) protein |
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| Protein accession | YP_001430163 |
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| Protein GI | 156740034 |
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| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0070148 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000279381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCATCTG TCTTTTCACG CATTGTGCGT GGTGAACTGC CGTCAGCGAA AGTGTATGAG
GACGACGAGA CGCTGGCGTT TATGGATATT AATCCCGCCA GTCGGGGGCA TACGCTGGTG
ATCTGTAAGG AAGAGCACCC GGACATTTTC ACCACACCGC CACATCTGAT TGCGGCGGTT
GCGCAGACGG CGCAGAAAGT GGCGCTGGCG CTCCGCGCTG CGCTGAACAT CGATGGATTG
AATGTCGTCC AGAACAACGG CGCCGCCGCC GGGCAGGTGG TGTTTCATTA CCACGTCCAT
CTGATACCGC GCTGGAAGGG AGACCACGTG CTTCGACCCT GGACGCCGCA TCCTGCCGAC
CCGTCTGAAC TCCAGGCGAT TGCGGAACAG GTTCGGGCGG CGCTGAACGA TCAGAGGGTG
GAACGTTGA
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| Protein sequence | MASVFSRIVR GELPSAKVYE DDETLAFMDI NPASRGHTLV ICKEEHPDIF TTPPHLIAAV
AQTAQKVALA LRAALNIDGL NVVQNNGAAA GQVVFHYHVH LIPRWKGDHV LRPWTPHPAD
PSELQAIAEQ VRAALNDQRV ER
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