| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_2133 |
|---|
| Symbol | |
|---|
| ID | 5459008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii Dugway 5J108-111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009727 |
|---|
| Strand | + |
|---|
| Start bp | 2100151 |
|---|
| End bp | 2101149 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | GGDEF family protein |
|---|
| Protein accession | YP_001425437 |
|---|
| Protein GI | 154707278 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.352584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCCG TTCAACAAAA GAAATTACAA TTACTATTTT CACATATTAG CGAATTAATT
ATCTCTCCCT ACAAGGTCGA TACCGTTATT GAAAAAATCA TGGAAGAGGT AGAAAATTTT
TTTACCCCTA CCAATTGGAG CCTGTTACGT TACGACTCAG TGGATGATGA GTTATTTTTT
GTTTACGCCA AAGGTTTGGA TGAAGAGATA ATTAAAGGCA TTCGGTTAAA AAGAGGTGAA
GGGATCGCAG GCACCGTCGC CGAAACCGGA AAATCGCTTT TTATTAGAGA TTGTCAAAAC
GATCCGCGCT TCAGTAAAAA GGTGGATAGA TCTTTTAAAC AAAAAACCCG CTCGATCATT
GCCGTACCGA TTAAATTCAA AGATGTGTTA TTAGGCGTTC TCGAACTCGT TAATTTAGAA
AATAATGTTT ATTTCTCCGA AGAGGATTGT TTTTTATTAG AAATTGTCGC TAATTTTTCA
GCCGTGGCCC TCATTAACGC CTCGCTTTTT GAAAACGTCG TCACACTCTC CCACCACGAT
CCGCTAACAG GGGCCTACAA CCGTACTAAA TTGGAGGAAC TTTTAAAAAA ATGGGAGAAA
GCCTCCGCTG TTTATGCCGA AAAGAAAATC AGCGTTTTTC TACTCGACTT AAACAACTTC
AAGGCTGTTA ACGATAACTA CGGCCATCGT GCGGGCGATC AATTACTCAA AAAAACCACC
CGTCTTATCA CTTCCTCAGC CCGAAAAAGG GATCTGTTTT TTAGAATTGG AGGCGACGAA
TTCCTTTATC TTGCTTTCCA TGACGATGCC TCCTCGATAA AAGAAGCCGA ACAAAGCCTG
CTTAAAAAGC TGGAATCCAT CTCAAGGGAA CTGGAACCTA AAATGGGGCG ATTTTCCATC
GGATACCAAA CAGGTCTTTT AAAGGATTTT AAAACGTTAG TCGCCAAAGC CGACGAAGCC
ATGTATATCG ACAAGCAACG TCGAAAATCA ATCTCTTGA
|
|---|
| Protein sequence | MVSVQQKKLQ LLFSHISELI ISPYKVDTVI EKIMEEVENF FTPTNWSLLR YDSVDDELFF
VYAKGLDEEI IKGIRLKRGE GIAGTVAETG KSLFIRDCQN DPRFSKKVDR SFKQKTRSII
AVPIKFKDVL LGVLELVNLE NNVYFSEEDC FLLEIVANFS AVALINASLF ENVVTLSHHD
PLTGAYNRTK LEELLKKWEK ASAVYAEKKI SVFLLDLNNF KAVNDNYGHR AGDQLLKKTT
RLITSSARKR DLFFRIGGDE FLYLAFHDDA SSIKEAEQSL LKKLESISRE LEPKMGRFSI
GYQTGLLKDF KTLVAKADEA MYIDKQRRKS IS
|
|---|
| |