Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_2114 |
Symbol | hslU |
ID | 5458929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | + |
Start bp | 2079013 |
End bp | 2080410 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_001425418 |
Protein GI | 209364282 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGATC TCAATCATTC TTATTTAACC GAAAACGCCC CTCTAGCAGC TCAAATGACA ATGACTCCGC GAGAAATCGT GGCAGAACTT GATAAATTCA TCATCGGTCA AAATGATGCC AAACGCGCGG TAGCCATCGC GCTTCGTAAT CGCTGGCGGC GTATGCAACT GGGAGAAGAA TTACGCCGCG AAATTTTCCC CAAAAATATT TTAATGATCG GCCCAACCGG CGTCGGCAAA ACCGAGATCG CCCGACGCTT ATCCGATCTC GCGGGTGCCC CCTTCCTTAA AATTGAAGCA ACCAAATTTA CGGAAGTGGG CTATGTCGGG CGCGATGTAG AATCCATTAT TCGCGATCTT GTCGATGTCG CCGTCAAAAT GACTCGTGAA AAGGCCATCC GTCAGGTAAA AAGTTTGGCG GAAGAAGCGG CTGAAGAGCG CGTTCTCGAC GCTCTCATCC CACCGGCCCG TGGAGGCTTC CAAGGTGAAC CGACAGCCGA GGAAAAACCC ACTGAGAAAA AAGAATCAGC CACTCGACAA CTCTTTCGTA AAAAACTGCG CAATGGCGGG CTGGACGATA AAGAAATCGA AGTCGAAGTT AGCGCGCACC CATCGTTTGA AATTATGGGT CCTCCGGGCA TGGAAGAAAT GGTTAGTCAA TTGCAAGGTA TTATGTCCAG TATGTCGAGC CGTCGCAGCA AATCTCGCCG CTTAAAAGTT AAGGATGCCT TGCGCATATT GGGAGAAGAA GAGGCAGCGA AATTAGTCGA CGAAGATCAA ATTAAATCCA CGGCTCTGGC CAGCGTTGAG CAAAATGGGA TCGTATTCAT TGACGAAATC GATAAAATCG TTAAACGCGA TGGCGCTGTC GGTGCCGATG TTTCCCGCGA AGGGGTGCAG CGTGATTTAT TACCGCTCGT TGAAGGCAGC ACGGTGTTTA CTAAATATGG GATGGTTAAA ACCGATCATA TTTTGTTTAT TGCCTCCGGC GCTTTCCATA TCGCCAAACC ATCAGACTTA GTGCCTGAAT TGCAAGGCCG CTTCCCCATC CGTGTTGAAC TGAAAGCGCT CACGGCGGAT GACTTTGTTC GAATATTAAC AGAACCCAAA GCGTCCCTGA CCGAACAATA CACCGAATTA TTGAAAACCG AAAACTTTGG ATTGTCGTTT ACCAAAGACG GTATCAAACG TCTGGCTGAA ATTGCTTATC AAGTTAACGA CCGCTCCGAA AACATCGGCG CACGCCGTTT GCATACCATT ATGGAACGGT TGTTAGAAGA AGTTTCCTTC GAAGCCACCG ACAAACAAGG CGAATCTATT ACGATTGATG CTGATTATGT TAACAAGCAA CTTAAGAAAC TAGCTGAAGA TGAGGATTTG AGTCGTTATA TTCTTTAG
|
Protein sequence | MADLNHSYLT ENAPLAAQMT MTPREIVAEL DKFIIGQNDA KRAVAIALRN RWRRMQLGEE LRREIFPKNI LMIGPTGVGK TEIARRLSDL AGAPFLKIEA TKFTEVGYVG RDVESIIRDL VDVAVKMTRE KAIRQVKSLA EEAAEERVLD ALIPPARGGF QGEPTAEEKP TEKKESATRQ LFRKKLRNGG LDDKEIEVEV SAHPSFEIMG PPGMEEMVSQ LQGIMSSMSS RRSKSRRLKV KDALRILGEE EAAKLVDEDQ IKSTALASVE QNGIVFIDEI DKIVKRDGAV GADVSREGVQ RDLLPLVEGS TVFTKYGMVK TDHILFIASG AFHIAKPSDL VPELQGRFPI RVELKALTAD DFVRILTEPK ASLTEQYTEL LKTENFGLSF TKDGIKRLAE IAYQVNDRSE NIGARRLHTI MERLLEEVSF EATDKQGESI TIDADYVNKQ LKKLAEDEDL SRYIL
|
| |