Gene CBUD_1522 details

Gene Information

• Locus tag: CBUD_1522
• Symbol: ligA
• ID: 5458237
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Coxiella burnetii Dugway 5J108-111
• Kingdom: Bacteria
• Replicon accession: NC_009727
• Strand: -
• Start bp: 1518915
• End bp: 1520936
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 44%
• Product: NAD-dependent DNA ligase
• Protein accession: YP_001424866
• Protein GI: 209364099

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATGGTG TGGAAGTTCC TGCAAAAATT CAAAAGCGGA TCGAGCGGTT GCGCCAGGAA 
ATTAATGATC ATAATTATCG TTATTACGTA TTATCACAGC CCACTATTCC CGACTCCGTT 
TATGATGAAC TTTTTCATGA GTTACAAAAG TTAGAGAAAA AATACCCTGA AACAATCACG 
CCTTCGTCTC CTACGCAACG CGTAGGTGCT GAGCCATTAA AAGTGTTTGA ACCCGTTCAT 
CATGAAATTC CGATGTTATC GCTGGATAAC GTGTTTGATG AAAAAGGGTT GCGGGCTTTT 
GATAAACGCA TTCGGCAGCG ATTGAAACTC GATAAACCCT TCGAATATGT GTGTGAACCA 
AAGATGGATG GTGTCGCCCT CAGTTTACTT TACGAAAATG GCGAATTAAT TCGGGCCGCC 
ACGCGGGGAG ATGGATATAC CGGCGAAAAC GTGACTCAAA ATACGCGAAC GATTGCATCG 
GTTCCCTTAC AATTGCGTGG AAACGATTAT CCTGAATTAG TGGAAATACG TGGCGAAGTG 
CTAATGCCGC GAGAGGGTTT TGCAAAATTT AATCGGGAGG CTGAAAAACG TGGCGACAAA 
ACCTTCGCCA ATCCGCGTAA CGCAGCATCC GGTAGTTTGC GTCAGCTGGA CCCGCGGATT 
ACAGCCAAAC GCCCCCTTAT TTTTTACGGT TATTTAATCG GTTTACTTAA AGGAAAAGAC 
TTTCCGAAAA ATCATTGTGA CGTATTGAAG TGGTTTAAGG ATTGGGGGAT TCCAGTTATT 
TCTGAAATAA AAGTTGTAGG TGGCATAGAG GGTTGTCTTG ATTATTACGA ACATTTAGTA 
AAAACTCGTG AAAAAATGCC TTTTGATATC GATGGAATCG TTATAAAAGT AAATTCTCTG 
CAAGTTCAGG CTGAATTAGG ATTCGTTTCG CGGGCGCCAC GATGGGCTAT CGCCTATAAA 
TTTCCAGCCC AGGAAAAAAT GACGGTAGTG AAAGCCATCG AGTTTCAAGT AGGACGCACG 
GGCGTTGTTA CCCCAGTGGC TCGTTTAGAA CCGGTGTCGG TAAGTGGAGT GACGGTCAGT 
AATGCGACTT TGCACAATTT CGACGAACTT TATCGTAAAG ACGTCCGCGT TGGGGATACG 
GTTATTGTGC GTCGAGCGGG TGATGTAATT CCCGAAGTGG TAGGACCGAT TTTAGCAAAG 
CGCCCCAAAA AGGCAAAACT CATAAAAATA CCGTCTCGCT GTCCTGTTTG CCACGCGGAA 
GTCATTAAAC CGGAGGGTGA AGCAGTAGCG CGCTGCGTGG GGGGATTATA TTGCCGGGCT 
CAATTGCGTG AGAGTATAAA GCATTTTGCT TCCCGTCGGG CGTTGGATAT TGAGGGGTTA 
GGAGATAAAT TGGTAGAGCT TTTCATTCAG GAAAAATTAA TTAAAGACAT TACGGGAATT 
TATCAACTTA AAAAATCAGC AATTACAGCT TTGCCGCGTA TGGGGGAAAA ATCGGCAGAA 
AATTTATTAA CAGCAATTGA GAAAAGTAAA AAAACAACCT TGCCGCGTTT TTTGTATGCA 
CTGGGAATTC GCGGCGTTGG TGATACTATC GCTCGAACGC TAGCGCGTCA TTTTCACGAA 
CTTGACCTTT TAATGAAAGC ATCAATTGAA ACCTTACAGG AAATTCGCGA TATCGGCCCC 
GTAGTGGCAG AAAATATTCA TGCTTTTTTC CATCAAAAAC ATAATGCGGA ATTAATTAAT 
AAATTAATTC ATTTAGGCGT GCATTGGCCG CAAGAGAAAG CAGTGGTGAA ATCGGAAATT 
GCTGGTAAGA CATTCGTACT TACCGGTGCT TTGAAATCAT TAACTCGCGA GGAAGCGGAA 
GAAAAAATCG AACGATCAGG AGGGAAGGCG ACCAGCAGCG TATCGAAGAA TACGGATTAT 
GTGATCGTGG GTGAAAACCC GGGTAGCAAA TACGAAAAGG CAAAAGCATT GGGAATTTCG 
CTTATTGATG AAGAAGCCTT CTTGAAATTA CTGAAATCGT AA 

 

Protein sequence

MNGVEVPAKI QKRIERLRQE INDHNYRYYV LSQPTIPDSV YDELFHELQK LEKKYPETIT 
PSSPTQRVGA EPLKVFEPVH HEIPMLSLDN VFDEKGLRAF DKRIRQRLKL DKPFEYVCEP 
KMDGVALSLL YENGELIRAA TRGDGYTGEN VTQNTRTIAS VPLQLRGNDY PELVEIRGEV 
LMPREGFAKF NREAEKRGDK TFANPRNAAS GSLRQLDPRI TAKRPLIFYG YLIGLLKGKD 
FPKNHCDVLK WFKDWGIPVI SEIKVVGGIE GCLDYYEHLV KTREKMPFDI DGIVIKVNSL 
QVQAELGFVS RAPRWAIAYK FPAQEKMTVV KAIEFQVGRT GVVTPVARLE PVSVSGVTVS 
NATLHNFDEL YRKDVRVGDT VIVRRAGDVI PEVVGPILAK RPKKAKLIKI PSRCPVCHAE 
VIKPEGEAVA RCVGGLYCRA QLRESIKHFA SRRALDIEGL GDKLVELFIQ EKLIKDITGI 
YQLKKSAITA LPRMGEKSAE NLLTAIEKSK KTTLPRFLYA LGIRGVGDTI ARTLARHFHE 
LDLLMKASIE TLQEIRDIGP VVAENIHAFF HQKHNAELIN KLIHLGVHWP QEKAVVKSEI 
AGKTFVLTGA LKSLTREEAE EKIERSGGKA TSSVSKNTDY VIVGENPGSK YEKAKALGIS 
LIDEEAFLKL LKS