| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_1372 |
|---|
| Symbol | |
|---|
| ID | 5459188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii Dugway 5J108-111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009727 |
|---|
| Strand | + |
|---|
| Start bp | 1367544 |
|---|
| End bp | 1369148 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | multidrug resistance protein B |
|---|
| Protein accession | YP_001424724 |
|---|
| Protein GI | 209364056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.964869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTTACT TTAGAGTCTT TCTCGATTTC GAATACGTTA AAGGCCACAT GTTCAAGATC
ACTGAAAAAA ATCGCAAGTG GTGGATTTTC GTTGCCATGT CGGGCGCGTT ATCGGTTGTA
TTTTTAGATC AAACTGCCAT TTCCGTCATC CTACCTCCTA TTCAAAAAGA TTTAGGCCTG
AGTAACGTTC TACTTCAATG GGTCATTAAT GCTTATTTAT TATCATTGGC TGCATTAGTC
ATTTTCGGCG GTAAATTAGG TGATGTTTTG GGTCATAAGC GTACTTTTTT GGCGGGAATA
ATTATTTTTG TTTTAGCCTC TATCTCTTGC GCCGCCGCAC AAACCAGTTA TTGGCTCGTG
ACCAGCCGGA TTATTCAAGG CGTCGGAGGC GCTTTTATGA TTCCGGTGAC GAGCGTGATG
ATGGCGCACG CTTTTTCGGA AAGTGAACGA GGCAAAGTTA TGGGATTATA CGTGGCCGTT
GCCCCTGTCT TTCTTTCCTT GGGCCCGTTA TTAAGCGGTT TACTCGCTCA TTATTTTAAT
TGGCGTTGGG TATTTTGGAT AAATGTTCCG ATTTCTTTAC TCAGCATTTT TCTAACCATT
ATTGCTGTTC CTGCGCGGGA AAATCAGCGG GATACCTCAA AGCCTTTGGA TTGGCTGGGA
TTCCTTACTT TTAGTCTTTT TATTGCTACG CTGGTTGTGG CTCTTATGGA AGGCGTTAAT
TTGGGTTGGA GTTCTAAAGA GATTATTTTT CTTTTTGTTG TTGCCGCATT TTCTGCGATC
GCTTTTATTT TTGTTGAAAG AAAAGCGGCT GATCCAATCG TTTCTCTTCA TTTATTTACT
CGAAAAACCT TTTTAAGCGC CAGTTTATGC TTGCTTTTCT TTACCTGTGC TTTTAGTTCT
TCTGTTTTTT GGGCGATTCT GCTCCAGAAA GTGATGGGAT ATTCGCCGGC GGCCACGGGT
TTATTTTATT TACCCGTGAC GATTCCGGTT ATGTTTATGG CGCCGCTCGG CGGAATGCTA
CGGGATAAAT ACGGCCCTCG CCTTCCTGTC ATGATGGGGT CAGCGGCGGT TGCTGCGGGG
TCTTTTTGGA TCGCGCTGTC GGCATTTAAG GGTCACTATT CAGCGATGCT TCCGGGGTTT
TTGTTATTTG GTTTGGGCCC AGCTTTGGTT TATTCGGCTG TAATGGCTAC CACCATCAGC
AGTGTACCAT TGTCGCAAAT GGGAATGGCA TCGGGAATTT CCAATGGCAT ACGCCAGTTA
GGCCGAGTTT TAGGGGTGGC GATGATCGGT TCTGTCATAA GCAACATCGA ACACTCTCGT
CTGATCCATT CTCATCTCGA TACGACGGGA AAACTCTCTC AAGTGTCCGA TCAACAACTC
ACTCATTTGC TATCAAACCC TGCAGCGGCA AAACATATTT TATCAGGGCT TTCACTTTCC
GAAATAAATC ATATTCATCT GGCGCTAAAA TCGGTCTTCA CATTTGCTTT CTCAATGGGC
ATGATTCTTG CGGGTTTTTT ACTAATTTTG ACACTCGGCA TCAGTTTTTT CTTGCCTAAC
AAACCACTGC GGCTTTTGTG GGATGAAAAA TCAAAATTAG TTTGA
|
|---|
| Protein sequence | MSYFRVFLDF EYVKGHMFKI TEKNRKWWIF VAMSGALSVV FLDQTAISVI LPPIQKDLGL
SNVLLQWVIN AYLLSLAALV IFGGKLGDVL GHKRTFLAGI IIFVLASISC AAAQTSYWLV
TSRIIQGVGG AFMIPVTSVM MAHAFSESER GKVMGLYVAV APVFLSLGPL LSGLLAHYFN
WRWVFWINVP ISLLSIFLTI IAVPARENQR DTSKPLDWLG FLTFSLFIAT LVVALMEGVN
LGWSSKEIIF LFVVAAFSAI AFIFVERKAA DPIVSLHLFT RKTFLSASLC LLFFTCAFSS
SVFWAILLQK VMGYSPAATG LFYLPVTIPV MFMAPLGGML RDKYGPRLPV MMGSAAVAAG
SFWIALSAFK GHYSAMLPGF LLFGLGPALV YSAVMATTIS SVPLSQMGMA SGISNGIRQL
GRVLGVAMIG SVISNIEHSR LIHSHLDTTG KLSQVSDQQL THLLSNPAAA KHILSGLSLS
EINHIHLALK SVFTFAFSMG MILAGFLLIL TLGISFFLPN KPLRLLWDEK SKLV
|
|---|
| |