Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_1370 |
Symbol | carB |
ID | 5457286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | - |
Start bp | 1362964 |
End bp | 1366185 |
Gene Length | 3222 bp |
Protein Length | 1073 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | carbamoyl-phosphate synthase large chain |
Protein accession | YP_001424722 |
Protein GI | 154707556 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.636117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAA GAAACGACAT AAAAAGTATT TTAATAATCG GCGCAGGCCC GATCATTATT GGTCAAGCCT GTGAATTTGA TTATTCAGGC ACTCAAGCGT GTCGCGCATT ACGCGAAGAA GGTTATCGCG TTATTTTAGT CAATTCCAAC CCCGCCACTA TTATGACCGA CCCCGATTTA GCGGATGCAA CTTATATCGA ACCCGTTCAT TGGGAAGTGA TCGCAAAAAT CATCGAAAAA GAAAAGCCCG ATGCGTTATT ACCCACCATG GGGGGGCAAA CCGGTCTAAA TTGTGCATTA GATTTAGTGC GTGAAGGTAT TTTGGAAAAA TATGGAGTGG AATTAATCGG CGCCTCTCGC GAAGCTATTG ATAAAGCGGA AGATCGTTCG TTATTTCAAA AAGCCATGTT GAAAATTGGC TTGCAAACGC CACGCTCAGG GTTGGCGCAT TCCATGGAAG ATGCTTGGAA AATACTGGAG CAGGTTGGTT TTCCTGCCAT TATTCGCCCT TCTTTTACAC TCGGTGGTAG CGGCGGGGGT ATCGCATACA ACCGCGATGA ATTTTTAGCT ATTTGTACGC GTGGCTTGGA ATTATCGCCT ACCACCGAAA TATTAATCGA CGAATCCATT GCCGGCTGGA AAGAATTTGA ATTAGAAGTC GTGCGGGATA AAAATGACAA TTGCATCATT GTTTGTAGCA TTGAAAATTT CGATCCCATG GGCATTCACA CGGGTGATTC AATCACCGTA GCGCCTGCAC AAACATTAAC GGATAAAGAA TACCAACGTA TGCGAGACGC TGCCATTGCC ATTTTGCGTG AAATCGGGGT GGAGACAGGC GGTTCTAATG TGCAATTTGG GATTAATCCC GATGACGGAC GCATGATCGT CATAGAAATG AACCCGCGGG TGTCGCGCTC TTCGGCGCTC GCCTCCAAAG CCACGGGCTT TCCAATCGCA AAAATCGCTG CAAAATTAGC AGTCGGTTAC ACTTTAGATG AATTGAAAAA TGAAATTACC GGTGGCCGAA CGCCGGCTTC TTTTGAACCC ACAATTGATT ATGTCGTCAC CAAAATTCCC CGTTTTAATT TTGAAAAATT CCCGCAGGCC GAACCCCGAT TGACTACTCA AATGAAATCT GTCGGTGAAG TCATGGCAAT TGGGCGAACT TTTCAGGAAT CGTTACAAAA AGCCATTCGT GGTTTAGAAG TGGGCGTTTA CGGCTTAGAG CCCAAAATAA AAATTGAGGA AGAGTTATCG GCAGACGATG TAAAAATCCG CGAAAAAATT AAAAAAGAAT TACGTTTTGC AGGTCCCGAA CGATTATGGT ACCTCGCAGA TGCCTTTCGC ATCGGTTTAA GTTGTGAAGA AGTTTACGAT TACAGCAAAA TTGACCGCTG GTTTTTAGTT CAAATCGAAG AGCTTGTCCA GCTAGAGAAA TCCATTGCGA ATAAATCCTT AAAAAAATTA TCACGAGATG AATTATTTTA TTTAAAGCGC AAAGGTTTTT CCGATCAACG CTTGGCGCAA TTGTTACAGA CCACTGAAGA CCGCGTTCGC CGGTATCGTC ACAAATTAAA AATTCGTCCG GTTTATAAAC GGGTTGATAC GTGCGCTGCT GAATTTGCGA CGGATACCGC CTATCTTTAT TCGACTTACG AAGAAGAAAA TGAGTGCGCC CCGACCAAGC GAAATAAAAT TATGGTCTTG GGCAGCGGAC CCAATCGTAT TGGCCAAGGG ATCGAGTTTG ATTATTGTTG CGTTCACGCG GCATTGGCTA TGCGGGAGCT GGGTTATGAG AGCATTATGG TGAATTGCAA CCCCGAAACA GTTTCTACAG ATTTTGATAT TTCAGATCGA TTGTATTTTG AACCGCTAAC GTTGGAAGAC GTTTTAGAAA TCGTGGCGAT TGAAAAACCA AGGGGAATTA TTGTGCAATT TGGCGGACAA ACGCCATTGA AATTAGCCAG CGCTTTGGCT AAAGCAGGCG TTCCTATCGT AGGAACCACT CCAGACGCTA TTGACCGTGC GGAAGATCGG GAACGTTTTC AAGCTTTAAT TCAAGGAGTA GGATTACGAC AACCGCCTAA CGGCACTGTA CGAAGCGTCG AAGAAGGACT GCGGTTGGCA AAAGTATTTG CGTATCCTTT AATTGTTCGT CCTTCCTATG TGTTGGGCGG CCGTGCGATG AAAGTGATTT ACAGTGAAAA AGAATTAACG CGTTACATGA CCAAAGATGT AATTGTCTCT GAGGGCGAAC CTTTATTACT GGATCGATTT TTAGACGATG CCATTGAGGT GGACGTGGAT GCGATTTGCG ATGGCGAAAA TGTGTTAATT GGGGGTATCT TGGAACATAT TGAACAAGCT GGCGTTCATT CCGGGGATTC CTCTTGCGCA TTTCCCCCGC ACAGTTTAAG CCCTGAAATC CAGGAACAAT TGCGCGAGCA AGTCCGGTTA ATTGCCAAAG AATTAGGGGT AGTGGGACTT ATCAACACCC AATTTGCTAT CCAGGAAAAT GAAATTTATG TGCTTGAAGT TAATCCGCGC GCTTCGCGCA CCGTTCCTTT TTTGGCTAAG GCTACGGGGA TGCCGCTTGC TAAAATTGCC GCGCGCACGA TGGTTGGTGT CTCCCTAACG GAGCAAAAGC TAATGGGAGA GTTTCGACCG CGTTATTTTG CGGTGAAAAA ACCGGTTTTC CCTTTCAATA AGTTTTTAGG AGTGGACCCT ATCTTAGGCC CAGAAATGCG ATCCAATGGC GAAGCGATGG GCATTGCGGA GAACTTTGGC CAAGCCTTTG CCAAAGGACA ATTGGCAGGG GGGGACGTCA TGCCAACGAG TGGACGGGCT TTTGTTAGTG TACGTGATGC GGATAAAAAA CGGGTGCTTA ACGTCGCTCG GTCCCTTGCG GATTTGGGTT TTGAAATCGT GTCAACGCGC GGCACCGCCA AAGCCCTCCA AGTGGCCGGA ATCCCGTGCA CCGTGGTAAA TAAAGTCAAT GAAGGCCGTC CTCACATCAT TGATATGATT AAAAATGACC AAATTAGTTT TATTATCAAT ACCACTGAAG GAGAGCAGGC GATAGAAGAT TCTCATACCA TCCGAACCAG CGCCGTGCAG CACAAAGTGT GCTATACGAC GACCTTAGCG GGAGGGGAAG CAGCCGTTTC CGCTTTGCAA TCCACTCATT CAGGGGAAAT CCATCGTTTG CAGGATTTAT AA
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Protein sequence | MPKRNDIKSI LIIGAGPIII GQACEFDYSG TQACRALREE GYRVILVNSN PATIMTDPDL ADATYIEPVH WEVIAKIIEK EKPDALLPTM GGQTGLNCAL DLVREGILEK YGVELIGASR EAIDKAEDRS LFQKAMLKIG LQTPRSGLAH SMEDAWKILE QVGFPAIIRP SFTLGGSGGG IAYNRDEFLA ICTRGLELSP TTEILIDESI AGWKEFELEV VRDKNDNCII VCSIENFDPM GIHTGDSITV APAQTLTDKE YQRMRDAAIA ILREIGVETG GSNVQFGINP DDGRMIVIEM NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELKNEIT GGRTPASFEP TIDYVVTKIP RFNFEKFPQA EPRLTTQMKS VGEVMAIGRT FQESLQKAIR GLEVGVYGLE PKIKIEEELS ADDVKIREKI KKELRFAGPE RLWYLADAFR IGLSCEEVYD YSKIDRWFLV QIEELVQLEK SIANKSLKKL SRDELFYLKR KGFSDQRLAQ LLQTTEDRVR RYRHKLKIRP VYKRVDTCAA EFATDTAYLY STYEEENECA PTKRNKIMVL GSGPNRIGQG IEFDYCCVHA ALAMRELGYE SIMVNCNPET VSTDFDISDR LYFEPLTLED VLEIVAIEKP RGIIVQFGGQ TPLKLASALA KAGVPIVGTT PDAIDRAEDR ERFQALIQGV GLRQPPNGTV RSVEEGLRLA KVFAYPLIVR PSYVLGGRAM KVIYSEKELT RYMTKDVIVS EGEPLLLDRF LDDAIEVDVD AICDGENVLI GGILEHIEQA GVHSGDSSCA FPPHSLSPEI QEQLREQVRL IAKELGVVGL INTQFAIQEN EIYVLEVNPR ASRTVPFLAK ATGMPLAKIA ARTMVGVSLT EQKLMGEFRP RYFAVKKPVF PFNKFLGVDP ILGPEMRSNG EAMGIAENFG QAFAKGQLAG GDVMPTSGRA FVSVRDADKK RVLNVARSLA DLGFEIVSTR GTAKALQVAG IPCTVVNKVN EGRPHIIDMI KNDQISFIIN TTEGEQAIED SHTIRTSAVQ HKVCYTTTLA GGEAAVSALQ STHSGEIHRL QDL
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