| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_0921 |
|---|
| Symbol | msbA |
|---|
| ID | 5457623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii Dugway 5J108-111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009727 |
|---|
| Strand | + |
|---|
| Start bp | 913599 |
|---|
| End bp | 915389 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | phospholipid-lipopolysaccharide ABC transporter |
|---|
| Protein accession | YP_001424303 |
|---|
| Protein GI | 209363922 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAATCA TACAATTAAA AATGAAAACA TTGACATCGC AGGGTATTCG CACCTACGGA
CGTTTGCTTC AAGCGACTAA ACAATATTGG CCTATTTTTC TTATTGGCGT CGTCGGCATG
ATTGCCGTCT CTCTCAGCGA TGCGGGATTC ACCTGGCTCA TTAAACCGAT CATTAACCGA
GGGTTTATTG CACGCGATTT AGTATTCATT CGTTGGCTCC CCTTTATTAT CGTTTTGGTC
TTCTTATTTC GCGGTGCGGC TAATTTCCTA TCGACTTATT TCATTAATCG AGTGGCGCGT
AATATCGTCA TGGATTTTCG CCGCGCTATT TTTAGTCATT TATTGCGCTT ACCCGCTGAA
TTTTACGATC GTCATAGTTC CGGCCATCTG TTATCGACTG TTATTTATAA CGTTGAACAA
GTCGCGCAAG CAAGTTCCGA CGCTTTAATT ATCACCTTGC AAGCTTCATC ATTGGTGGTG
GGTTTATTGG TCGTCATGTT TTTGGTGAGT TGGAAGTTAA CGCTGTTTTT CTTAGTGATC
ACCCCATTAA TCGCGTGGGT GATGAGAGTT TGCAGCGCCA GATTACGTCA CCTCAGTACA
AGCGTACAAA AGTCAGTGGG AGAAGTCACT CATATTGCGA GTGAAGCTAT CGAAGCTTAT
AAAATCGTCC GCCTTTATGG CGGACAAAAA TATGAAAACG AAAAATTTCG CCACGCCACG
AAGTTAAATC AGCAACGTGA GTTAAAAGTC GTGGTGACCA ATAGTGTAGG CACCTCCTTA
GTGCAATTAT TAATTGCGAT TCCAATTGCT ATCGTTCTGT TTTTTGCCAC TCAGCCTTCG
TTTCATGTAA CCGCGGGCAG TTTTGCATCG ATCGTTTCGG CAATGATTAT GATGCTGCGC
CCGGTACGGC GATTAACAAT GGTTAACAGT TATATTCAAA AAGGAATTGC TGCTGCTGAG
AGTATTTTTA AGTTACTGGA CGAAGATGTC GAAAAGGACA GGGGGGAGCG CCATTTAGTG
AGGGCAAGGG GAGCAATTGA ATATCAGGGG GTTTCTTTTG CTTACGATAA TTCTAAAAAA
ACTATTTTAA GTGAGATCAG TTTTTCTATC GAGCCCGGGC AAATGGTAGC CATTGTAGGT
CGATCTGGGG CGGGGAAATC CACTTTAATT AATTTATTGC CGCGTTTTTA TGATGCCTCG
ACCGGCGTCA TAAAGATCGA TGGCATTAAT ATTAAAGAGT TTCGGTTACA AGAATTACGT
AACCAATTCG GTTTGGTGTC GCAACACACC ACGCTATTTA ACGACACCAT TTTGAATAAC
ATCGCTTACG GTCAAGCGGG CAGTATTGAT AAAAGAAAAA TTATCGAAGC CGCCCGGGCG
GCACATGCGA TGGAATTTAT CGAGCAATTA CCGGAAGGAT TAGACACGGT TATTGGAGAA
AACGGCGTGC GCTTTTCAGG AGGGCAGCGA CAGCGTATTG CGATCGCCCG CGCTTTATTT
AAAAACGCTC CCATTCATAT TTTGGACGAA GCGACTTCGT CGTTGGATAC GCACTCTGAG
CGACACATTC AGGCAGCGCT TGATAATTTA ATGGATCAAT GCACTACATT GGTCATTGCA
CACCGGTTGT CAACCATTGA AAGAGCGGAT TGGATTATGG TGTTAGAAGA AGGACGATTA
ATAGAGAAAG GAACCCATCA GCAATTACTC ACTTTAAACG GCGCTTACGC GGAATTATAC
CGCATGCAAT TTGCTGAAAA GCCGGCGGCT ATGACGGCCC TGGATGAATA A
|
|---|
| Protein sequence | MAIIQLKMKT LTSQGIRTYG RLLQATKQYW PIFLIGVVGM IAVSLSDAGF TWLIKPIINR
GFIARDLVFI RWLPFIIVLV FLFRGAANFL STYFINRVAR NIVMDFRRAI FSHLLRLPAE
FYDRHSSGHL LSTVIYNVEQ VAQASSDALI ITLQASSLVV GLLVVMFLVS WKLTLFFLVI
TPLIAWVMRV CSARLRHLST SVQKSVGEVT HIASEAIEAY KIVRLYGGQK YENEKFRHAT
KLNQQRELKV VVTNSVGTSL VQLLIAIPIA IVLFFATQPS FHVTAGSFAS IVSAMIMMLR
PVRRLTMVNS YIQKGIAAAE SIFKLLDEDV EKDRGERHLV RARGAIEYQG VSFAYDNSKK
TILSEISFSI EPGQMVAIVG RSGAGKSTLI NLLPRFYDAS TGVIKIDGIN IKEFRLQELR
NQFGLVSQHT TLFNDTILNN IAYGQAGSID KRKIIEAARA AHAMEFIEQL PEGLDTVIGE
NGVRFSGGQR QRIAIARALF KNAPIHILDE ATSSLDTHSE RHIQAALDNL MDQCTTLVIA
HRLSTIERAD WIMVLEEGRL IEKGTHQQLL TLNGAYAELY RMQFAEKPAA MTALDE
|
|---|
| |