Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_0676 |
Symbol | dapE |
ID | 5457635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | - |
Start bp | 656752 |
End bp | 657876 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_001424080 |
Protein GI | 154707315 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.438306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAA CGCTGAATCT TCTTAAACAA TTAATCGAGC GCCCTTCCAT CACACCTAAC GACGCAGGTT GCCAAACAAT TTTAATCGAT CGTTTAAAAT CCGTAGGCTT TCAATGCGAA CATTTACCTT TCGGCGAAGT TCATAATTTT TGGGCCTGGC ATGGCCATCA ATCACCTTTT ATTATTTTTG CAGGCCACAC AGATGTAGTT CCGCCCGGCG ATGAAACACA ATGGCACTCC CCCCCCTTCA CTCCCACAGA AAAAAATGGC TATATTTATG GCCGCGGCGC TGCTGATATG AAAAGCGGAT TAGCCGCCAT GGTCGTCGCG GCGGAAAATT TCGTTAAACA GAATCCCGAC CACAATGGCA CAATCGGATT TATCGTTACC AGTGATGAAG AAGGCCCGGC CGAAAATGGT ACGCAAAAAG TCGTGGACTA TTTACAACAA AAAAATATTA AATTGGATTA TTGCATCGTG GGCGAAGCCA GCAGCAACGA AAAATTGGGC GACGCCATCA AAATTGGGCG ACGCGGTTCG ATGCACGGGG AATTAACCAT CATCGGCAAA CAAGGGCACA TTGCTTATCC CCATCTCGCC GATAATCCTA TTCACCGCAG TTTCCAAGCC TTCGAGGCAT TAGCAAAAAC AAAATGGGAT GAAGGCAATG AGCATTTTAC CCCTACTTCA TTTCAATTTT ATAACGTCGA AGCAGGCGCG GGCGCTGCCA ATGTTATTCC TGCGACGTTA AAGGCAAAAT TTAATTTTCG CTTTGCCCCC ATTCATACGA CTCAACAATT ACAACAAAAA GTCGAACGCA TTTTAAATTA CTATCAATTA AACTATGACA TCCAATGGAA CGTCTCAAGC CAACCGTTTT TTAGCGGCAA CGGCCGGTTA GCCACATTCG TTCGTCAAGC CATTCAAGAA ATCTGCCACC TCAATACCGA ACCCAATACC TACGGTGGGA CCTCGGACGG CCGCTTTATC GCTACCACCG GCTGCGAAGT CATCGAACTT GGCCCCGTTA ATAAAACGGC CCACCACGTC AATGAAAATA TTTGCATCGC GGACTTAGAA AAACTTACGG ATATTTATTT TCGGACTCTT CAGTTGCTCA CCTAA
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Protein sequence | MSETLNLLKQ LIERPSITPN DAGCQTILID RLKSVGFQCE HLPFGEVHNF WAWHGHQSPF IIFAGHTDVV PPGDETQWHS PPFTPTEKNG YIYGRGAADM KSGLAAMVVA AENFVKQNPD HNGTIGFIVT SDEEGPAENG TQKVVDYLQQ KNIKLDYCIV GEASSNEKLG DAIKIGRRGS MHGELTIIGK QGHIAYPHLA DNPIHRSFQA FEALAKTKWD EGNEHFTPTS FQFYNVEAGA GAANVIPATL KAKFNFRFAP IHTTQQLQQK VERILNYYQL NYDIQWNVSS QPFFSGNGRL ATFVRQAIQE ICHLNTEPNT YGGTSDGRFI ATTGCEVIEL GPVNKTAHHV NENICIADLE KLTDIYFRTL QLLT
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