Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_0565 |
Symbol | truB |
ID | 5458268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | + |
Start bp | 543095 |
End bp | 544024 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001423975 |
Protein GI | 154707141 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCGA CGAATCATCC TAAACTGTTT AAACGTCCCG TGGATGGCGT TTTATTGTTA GATAAGCCGG GCGGGATGAC CTCCAACGAG GCACTGCAGC GCGTTAAGCG CTTATTTCAC GCGAAAAAAG CAGGACATAC GGGGAGTTTA GATCCGCTTG CCACCGGACT CTTGCCGATT TGTTTAGGCG AAGCGACTAA ATTTTCTCAA TTTCTTTTGG GAGCGGATAA ATCCTATAGT GTCAAAGGCC GATTAGGTGT TCGTACCGCA AGTGGGGACA GTGAAAGTCC CATTCTTACA GAACGCCCTA TTCCCAAACT CACAAAACGG GCATTGGAAA AAACTTTATC CGCCTTTCGT GGTGTTATTG ATCAAACGCC TTCCATGTAT TCCGCCTTAA AACATAAAGG CCAACCGTTG TATAAACTCG CGCGGCAAGG AATTGAGGTC GAGCGTAAAA CACGGCAGGT TACTATTTAC GAGTTAACTT TGTTGGACTG GGATAACGAA TCGATTGAAC TTTATGTGCA TTGCAGTAAG GGCACTTATA TCAGAACGTT ACTCGATGAT GTGGGTGAAG CGCTCGGTTG CGGCGCTCAT GTTGTCGCGC TGCGCCGACT TCGCGTGGCT CATTATCACG AAGATCAAAT GATCAAACTC GCCCATTTGG AACGAGAATA CGATAAAGCA AATTATACCG GGTTAGACCG CTACTTATTA CCTCTAGAAA CAATGGTCTC CCATTTCCCC GCGATCAAGT TATCAAGTTC AACTGCTTTT TATTTACAAC AAGGCCAAGC CGTAATGGTC CCAAACGCAC CAACCCACGG TTTCGTGCGC TTACGCGATC AGAACGATCA ATTTATCGGC ATCGGAGAAA TTTTAAGCGA CGCCCGAATT GCCCCGCGAA GGCTGATTCA GAAGAGGTGA
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Protein sequence | MTATNHPKLF KRPVDGVLLL DKPGGMTSNE ALQRVKRLFH AKKAGHTGSL DPLATGLLPI CLGEATKFSQ FLLGADKSYS VKGRLGVRTA SGDSESPILT ERPIPKLTKR ALEKTLSAFR GVIDQTPSMY SALKHKGQPL YKLARQGIEV ERKTRQVTIY ELTLLDWDNE SIELYVHCSK GTYIRTLLDD VGEALGCGAH VVALRRLRVA HYHEDQMIKL AHLEREYDKA NYTGLDRYLL PLETMVSHFP AIKLSSSTAF YLQQGQAVMV PNAPTHGFVR LRDQNDQFIG IGEILSDARI APRRLIQKR
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