Gene Xaut_4781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4781 
SymbolrpsE 
ID5422047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp5305502 
End bp5306059 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content68% 
IMG OID640884044 
Product30S ribosomal protein S5 
Protein accessionYP_001419656 
Protein GI154248698 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.694187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000059117 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCGTG AACGGGAACA GCGCCACGAG CGCGAAGATC GCGACAACAC GTTTGTGGAC 
AAGCTGGTCC ACATCAACCG TGTCGCGAAG GTGGTGAAGG GCGGCCGTCG CTTCGGTTTC
GCCGCCCTGG TGGTTGTGGG TGACCAGAAG GGCCGCGTCG GCTTCGGCCA CGGCAAGGCC
CGTGAAGTGC CCGAGGCCAT CCGCAAGGCC ACGGAGAGTG CCAAGCGTGC GCTCATCCGC
GTGCCCCTGC GCGAAGGCCG GACCCTGCAC CACGACGTGC ATGGTCACCA TGGCGCCGGC
AAGGTGATCC TGCGCGCCGC CCCGGCGGGT ACCGGCATCA TCGCCGGCGG CCCGATGCGC
GCGGTGTTCG AGACCCTCGG CATGCACGAT GTGGTGGCGA AGTCCTTCGG GTCTTCCAAC
CCCTACAACA TGGTGCGCGC CACGTTCGAC GCCCTCAAGA ACCAGGACAG CCCGCGCTCG
GTCGCGGCCC GTCGCGGCAT CAAGGTGTCG CAGCTCCAGT CCCGCCGCCG CGTCGAAGAC
GCGGAAGCGA CGGACTGA
 
Protein sequence
MAREREQRHE REDRDNTFVD KLVHINRVAK VVKGGRRFGF AALVVVGDQK GRVGFGHGKA 
REVPEAIRKA TESAKRALIR VPLREGRTLH HDVHGHHGAG KVILRAAPAG TGIIAGGPMR
AVFETLGMHD VVAKSFGSSN PYNMVRATFD ALKNQDSPRS VAARRGIKVS QLQSRRRVED
AEATD