| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4709 |
|---|
| Symbol | |
|---|
| ID | 5420777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 5222359 |
|---|
| End bp | 5223324 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640883973 |
|---|
| Product | periplasmic solute binding protein |
|---|
| Protein accession | YP_001419585 |
|---|
| Protein GI | 154248627 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.150845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACC GACGTATCGT CCTCGGCGCA CTTGCCGGCC TCGCGCTTGC CAGCCCGGCC
CTGGCGCAGG GCACACCCGC CCCCGCCCAG AAGCTGCCGG TGGTGGCCTC CTTCTCCATC
CTCGGGGATT TCGTGAAGCA GGTGGGCGGC GACCGGGTGG CCGTCACCAC CATCGTCGGA
CCCAATGGCG ATGCCCACGT CTACCAGCCG ACCCCCGCCG ACGCGAAGGC GGTCACCGCA
GCCAAGGTGG TGTTCGTGAA CGGCCTCGGC TTCGAGGGCT GGCTCGACCG CCTCATCAAG
GCGTCCGGCA CCAAGGCGCC CATCGTGGTC GCCACCCAGG GCATCACGCC GCGCACCGGC
TTCGTCGACC ATGACGAGGA CGAGAAGCCG AAGGGCAAGG ACAAGCACGC CAAGGAGGAG
CATGGCCACG ACCACGGCGG CATCGATCCC CACGCCTGGC AGTCCATCGC CAACGCCAAG
GTCTATGTGG CCAACGTGCG CGACGGCCTG ATCGCCGCCG ATCCGGACGG CCGCGACGCC
TACACCGCCA ATGCGGCCGC CTATACCGCC AAGCTCGACG CCCTGGAGAC CGAGGTGAAG
GCGGCGCTGG CCCGCATCCC GGCCGAGCAG CGCCGCATCA TCACCTCCCA CGACGCCTTC
GGCTATTTCG GCGAGGCCTA TGGCGTGGTG CTGGTGGCGC CCGAGGGCGT CTCCACCGAG
AGCGAGGCCT CGGCCAAGGA CGTGGCGCGC ATCATCCGCC AGATCAAGGC GCAGAAGATC
CCCGCCGTGT TCGTGGAGAA CATCACCGAC CCGCGCCTGA TGCAGCGCAT CGCCAAGGAA
ACCAGCGCCA AGGTGGGCGG CACGCTCTAT TCCGACGCCC TCTCCGATGA CAAAGGCCCG
GCGAGCACCT ACATCGACAT GATGCACTCC AACGTGCGCG AGCTTTCCGC CGCTTTGGCG
AGCTGA
|
|---|
| Protein sequence | MLNRRIVLGA LAGLALASPA LAQGTPAPAQ KLPVVASFSI LGDFVKQVGG DRVAVTTIVG
PNGDAHVYQP TPADAKAVTA AKVVFVNGLG FEGWLDRLIK ASGTKAPIVV ATQGITPRTG
FVDHDEDEKP KGKDKHAKEE HGHDHGGIDP HAWQSIANAK VYVANVRDGL IAADPDGRDA
YTANAAAYTA KLDALETEVK AALARIPAEQ RRIITSHDAF GYFGEAYGVV LVAPEGVSTE
SEASAKDVAR IIRQIKAQKI PAVFVENITD PRLMQRIAKE TSAKVGGTLY SDALSDDKGP
ASTYIDMMHS NVRELSAALA S
|
|---|
| |