| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4708 |
|---|
| Symbol | |
|---|
| ID | 5420776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 5221474 |
|---|
| End bp | 5222346 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640883972 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_001419584 |
|---|
| Protein GI | 154248626 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.13978 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCTT ACGACGTGCT CATCGCTCCG TTCACGGAGT TCGAATTCAT GCGGCGGGCG
CTGGCCGGCG TGTTCGCGCT GGCGCTGGGG GCGGGGCCGC TCGGCGCCTT CCTCATGCTC
CGGCGCATGT CGCTGACGGG GGATGCCATG GCCCATGCCA TCCTCCCCGG CGCCGCCATC
GGCTTCCTGT TCGCCGGGCT GAACCTCTAC GCCATGACTG CCGGCGGGCT CGCCGCCGGG
CTTCTGGTGG CGGTGGGCGC CGGCGTGGTG GCCCGGGCCA CCGGCATGAA GGAGGACGCC
TCGCTCGCGG CCTTCTACCT GATCTCGCTG GCGCTCGGCG TGCTCATCGT GTCGCTGAAG
GGGTCGAACG TGGACCTGCT GCACGTGCTG TTCGGCACCG TGCTGGGCAT CGACGACGCC
ACGCTGATCC TCATCGCCTC CATCACCACG CTCACGCTGG TGACGCTCGC CTTCATCTGG
CGGCCGCTGG TGCTGGAATG CGTGGACCCC ACCTTCCTCG CCTCGGTGAG CCGGGCCGGC
GGGGTGAGCC ACATCGCCTT CCTCTCGCTG GTGGTGATGA ACCTGGTGGG CGGCTTCCAC
GCGCTGGGCA CGCTGCTCTC GGTGGGGCTG ATGATGCTGC CCGCCGCCAC CGCGCGCTTC
TTTGTGCGCG ACCTCACCGC GCTGGTGACC CTCTCCACGG TCATCGCGTT CGCGGCCGGC
ACCATCGGCC TGCTGGTCTC CTACCACCTC GGCACGCCGT CCGGCCCCTC CATCATCCTG
GTGGCGGGCC TTGCCTACGC CGCTGCCGTG GTTTTCGGCC CCATCGGCGG GCTTGTCACC
CGCCTCGTTC CGGGCCGCCA TCTCGAAGCC TGA
|
|---|
| Protein sequence | MNPYDVLIAP FTEFEFMRRA LAGVFALALG AGPLGAFLML RRMSLTGDAM AHAILPGAAI
GFLFAGLNLY AMTAGGLAAG LLVAVGAGVV ARATGMKEDA SLAAFYLISL ALGVLIVSLK
GSNVDLLHVL FGTVLGIDDA TLILIASITT LTLVTLAFIW RPLVLECVDP TFLASVSRAG
GVSHIAFLSL VVMNLVGGFH ALGTLLSVGL MMLPAATARF FVRDLTALVT LSTVIAFAAG
TIGLLVSYHL GTPSGPSIIL VAGLAYAAAV VFGPIGGLVT RLVPGRHLEA
|
|---|
| |