| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4668 |
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| Symbol | |
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| ID | 5420882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 5161064 |
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| End bp | 5164306 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640883932 |
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| Product | ribonuclease |
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| Protein accession | YP_001419545 |
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| Protein GI | 154248587 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.156996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACA AGATGCTCAT CGATGCGACC CACCCGGAGG AAACCCGGGT GGTGGTCGTG
CGCGGGAACA GGGTCGAAGA GTTCGACTAT GAGTCTGCGT CCCGCAAGCA GTTGCGGGGC
AACATCTATC TGGCGAAGGT GACGCGCGTG GAGCCCTCGC TCCAGGCCGC CTTCATCGAA
TATGGCGGCA ACCGCCACGG CTTCCTCGCC TTCAGCGAGA TCCATCCCGA CTATTACCAG
ATCCCCGTGG CTGACCGCCT CGCCCTGATC GAGGAGGAGG AGCGCGCCGC CCGCCTCGCT
GACGACGAGG CCGAGCTGAA GGACCGCCGC CGCGAACGCG GCCGGGCCCG GCGCTCCAGC
TCCGACCGCA CCGTGAGCGA GCCCGTCGAG GAGGCCGAGG TGGTCCCCGC CGAGGCAGAG
TCTGCCTCCG GCGACGCACC GTCCGGCGTT GAGGCGTCTT CGGATACCGC TGCGACCGAA
TTCGACGCGG CGCCCCAGGG CGATGCGCCT GAAGCCGGCC AGCCCCAGGC TGAAGCCTCC
TCCTGGCAGG ACGCTCCCGC CGCCGAGAGC GCGCAGCCCG CGCCCGAGCA TGCAGCGCCT
GAGCACCACG CCCCCGAGAG CGTGACCGAC CTTTTGTCCG CCGCCGAGGC TGCCGAAGCG
TCCGCCGAGG TCCGCGAAGC CGAGGTCGAG GCCACTTACG GCACTCCCCT GCCGGCTCCG
CAGGAGCAGC ACACCGACGC GAACGCCGAC CTGCGCCTGC GCGAGGCCCC CGAGGGCGAG
ACCCATCCCG CCCCCATCCT CGACATCGAG GAGACCCCCG CCGAGACCCG TCGCACCGAA
ACCCGCCCCG TCGAGGACGA CGAGGATGAG GACGAGGACG ACGGGGATGT CGACCAGATC
GACGAGGAAG AGGAGATCGA GCATCTCGGC GCCGACGAGG ATGCCCTGGA AGAGGTGCCC
GAGCGCGCGC CGCAGCGTCG TGCCCGCTCC TACAAGATCC AGGAAGTCAT CCGCCGCCGC
CAGGTGATGC TGGTGCAGGT GGTGAAGGAA GAGCGCGGCA ACAAGGGCGC CGCCCTCACC
ACCTACCTCT CGCTGGCCGG CCGCTATTCC GTTCTCATGC CCAACACCGC CCGTGGCGGC
GGCATTTCCC GCAAGATCAC CAACACCGTT GACCGCAAGC GCCTGAAGGA AGTGGTGCAG
GACCTGGAGG TGCCGGAGGG GATGGGCATC ATCCTGCGCA CCGCCGGCGC CAACCGCACC
AAGGTGGAGA TCAAGCGCGA CTTTGAATAC CTCCTGCGCT TGTGGGAGAC GGTGCGCGAG
CTGACCCTGT CCTCGGCCGC GCCGAACCTG GTCTATGAGG AAGGCTCGCT CATCAAGCGC
GCCATCCGCG ACCTCTACAA CAAGGACATC GACGAAGTTC ACGTGGCCGG CGAGGAAGGC
TATCGCGAGG CCAAGGACTT CATGCGCATG CTCATGCCGA GCCATGCCAA GTGCGTGCTG
CCCTATCGCG AGCCGCAGCC CATCTTCGCC CGCTACGGGG TGGAGCAGCA GCTCGACGCC
ATGTTCTCCC CGGTGGTGCA GCTCAAGAGC GGCGGCTACA TCGTCATCAA CCCGACGGAG
GCCCTGGTCT CCATCGACGT GAACTCGGGC CGCGCCACCC GCGAGCACCA TATCGAGGAC
ACCGCGCTCA AGACCAACGT GGAAGCCGCC GAGGAGATCG CCCGCCAGCT GCGCCTGCGC
GATCTGGCCG GCCTCATCGT GGTCGACTTC ATCGACATGG AGGAGAAGCG CAACAACCGG
GCGGTGGAGC GCAAGCTCAA GGATTGCCTG AAGAACGACC GGGCGCGCAT CCAGATCGGT
CGTATCTCGC ACTTCGGCCT GCTGGAGATG TCGCGCCAGC GCATCCGCAC CGGCGTGCTG
GAAAGCTCCA TCGAGGTGTG CCCGCACTGC GGCGGCACCG GCCACGTGCG CTCGGCGGCC
TCCGTGTCGC TCCAGCTGCT GCGCGCGCTG GAAGAGCAGC TTTTGCGCGC CGCCACCCAC
AATCTCTACG CCCGCACCCG CACCGAGGTG GCGCTCTATG TGCTCAACCA GAAGCGCGCT
CACCTGCGCG AGCTGGAAGA GCGCTTCTCC GTCACCCTGG CCATCGTCGC CGACGAGAGC
GTGACCGGCC ACCAGCCCTT CATCATCGAG AAGGGCGAGC TGGCCGTGCC GCCGGCCCCC
GCGCCGCGTC CCAGCTCGGT GGTGCACCCC GATTCCATCC TGCTCGACGA GGATTACGCC
GAGGACGAGG ACGAGGAGAC GGTGGAGGAG ACCGCCGAGG CTGAGGCCGA AGCCGGTCCC
GAGGCCGAAG GCGAAAGCGG CGATCGCGCC GATGACGGCA ATCGCAAGCG TCGCCGTCGC
CGCCGCCGGC GGCGGGGCGA GAAGGACGAG ACCCGCGAGG GCAGCGCCGA GGGCGAGGAG
GAGGACGACA CCTCCGCCGA GGCCCAGGAT GGCGACGAGG GCGAAGGCGA GGAGGACGAC
CGCTCCGAGG AGGAGCGCGC CGCCGATGCC GAACGCACTG ACGAGGAAAA TGCCGAGCGC
CGTCGTCGCC GTCGCGGCCG TCGCGGCGGC CGTCGCAACC GCCGGGAGCG CGAGGGCGAG
GGCGACGCCC CGCTCGCAGC CGGTGAGGAC GCCGACGAGG CCGACGACAC GGATGCCGAA
GGCCGGGACG CGGGAGAAGC CGCCCCCGAG TTCGAGGTCC GCATTCCTGT GACCCCGGTG
GAGGGCCCCG AAGTCGCGGC CGGGGAGGTC CCGTCCGTGC CCGTCCTGTT CACCCCGGCC
CCGGTGCCGG CGGTGGTGGA GGCGCCCGAG GCCAAGGTTG CGGAAACGAA GGCTGCCGAG
CCGGAAGCCG TCGAACCGGC CAAGCCGCGT CGCCGCTCCA CGGTGCGCGA GAAGGCTCCG
GTGATCGTCA TGGCGGACAC CGCCAGGGCA TCTGCGGTGA CCAGCGCTGC GGCCGAGCCT
CAGCCGACGC CGGAGGCTTC CGCTGCGGCG TCCGAAGTCG CGGCTTCAGG CATTACCGAA
GTCGCGGGCT CCGAGGTCCC TGCCCCCGAA TTTCCCGCCT CCGAAGCCGC CACCTTCGAG
GCGCCGGCCC CCGAGGCCGC ATCCCCGCCG GCCCCTGCCC CCGCGCCGGC GGCCCCCGCC
AGCGAGGAGA GCCCCGCCAG CAAGAAGTCC GGCTGGTGGC AGCGCAAGCT GTTCGGCGGC
TGA
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| Protein sequence | MANKMLIDAT HPEETRVVVV RGNRVEEFDY ESASRKQLRG NIYLAKVTRV EPSLQAAFIE
YGGNRHGFLA FSEIHPDYYQ IPVADRLALI EEEERAARLA DDEAELKDRR RERGRARRSS
SDRTVSEPVE EAEVVPAEAE SASGDAPSGV EASSDTAATE FDAAPQGDAP EAGQPQAEAS
SWQDAPAAES AQPAPEHAAP EHHAPESVTD LLSAAEAAEA SAEVREAEVE ATYGTPLPAP
QEQHTDANAD LRLREAPEGE THPAPILDIE ETPAETRRTE TRPVEDDEDE DEDDGDVDQI
DEEEEIEHLG ADEDALEEVP ERAPQRRARS YKIQEVIRRR QVMLVQVVKE ERGNKGAALT
TYLSLAGRYS VLMPNTARGG GISRKITNTV DRKRLKEVVQ DLEVPEGMGI ILRTAGANRT
KVEIKRDFEY LLRLWETVRE LTLSSAAPNL VYEEGSLIKR AIRDLYNKDI DEVHVAGEEG
YREAKDFMRM LMPSHAKCVL PYREPQPIFA RYGVEQQLDA MFSPVVQLKS GGYIVINPTE
ALVSIDVNSG RATREHHIED TALKTNVEAA EEIARQLRLR DLAGLIVVDF IDMEEKRNNR
AVERKLKDCL KNDRARIQIG RISHFGLLEM SRQRIRTGVL ESSIEVCPHC GGTGHVRSAA
SVSLQLLRAL EEQLLRAATH NLYARTRTEV ALYVLNQKRA HLRELEERFS VTLAIVADES
VTGHQPFIIE KGELAVPPAP APRPSSVVHP DSILLDEDYA EDEDEETVEE TAEAEAEAGP
EAEGESGDRA DDGNRKRRRR RRRRRGEKDE TREGSAEGEE EDDTSAEAQD GDEGEGEEDD
RSEEERAADA ERTDEENAER RRRRRGRRGG RRNRREREGE GDAPLAAGED ADEADDTDAE
GRDAGEAAPE FEVRIPVTPV EGPEVAAGEV PSVPVLFTPA PVPAVVEAPE AKVAETKAAE
PEAVEPAKPR RRSTVREKAP VIVMADTARA SAVTSAAAEP QPTPEASAAA SEVAASGITE
VAGSEVPAPE FPASEAATFE APAPEAASPP APAPAPAAPA SEESPASKKS GWWQRKLFGG
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