| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4574 |
|---|
| Symbol | |
|---|
| ID | 5423763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 5056219 |
|---|
| End bp | 5056662 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640883839 |
|---|
| Product | PilT domain-containing protein |
|---|
| Protein accession | YP_001419452 |
|---|
| Protein GI | 154248494 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0680986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0209411 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCGCT ATCTCCTCGA TACCAACATC ATCAGCAATA TCGTCAAGCC GCAGCCGTCG
GCGTCGTTGC TGGCTTGGAT GGCAACACAG CGCGACGAGG ACCTGTTTAT TGCGTCATTG
ACCGTCGCTG AAATTCGACG TGGCATTCTG GAAAAGCCCC GCGGCAAGAA ACGCGATGCG
CTCGACGCCT GGTTTGTCGG GCCGGAGGGG CCGCAGGCCC TGTTCACGGG CCGCATTTTA
TCCTTCGACG CCAAGGCCGG CCTGATCTGG GCGCGGCTGA TGGCGGAGGG CAAGGTGGCG
GGTCGTCCCC GTAGCGGACT CGACATGATC ATCGCCGCCG TCGCCGGTGC GAATGAATGC
GTCGTGGTGA CTGACAACGA GAAGGACTTC GCCGGGCTCC AGATCATCAA TCCGTTGCGT
GGCGGCCTGG AGGGGGAAAA ATGA
|
|---|
| Protein sequence | MTRYLLDTNI ISNIVKPQPS ASLLAWMATQ RDEDLFIASL TVAEIRRGIL EKPRGKKRDA
LDAWFVGPEG PQALFTGRIL SFDAKAGLIW ARLMAEGKVA GRPRSGLDMI IAAVAGANEC
VVVTDNEKDF AGLQIINPLR GGLEGEK
|
|---|
| |