| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4475 |
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| Symbol | rimO |
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| ID | 5421988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4968808 |
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| End bp | 4970157 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640883739 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001419353 |
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| Protein GI | 154248395 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.439189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA CCGTCCTGAA CTCCGCGCCA TCCAAGGCTG CGCCCCGCAT CTCCTTCGTC
TCGCTGGGCT GCCCCAAGGC ACTGGTGGAT TCAGAACGCA TCGTCACCCG GCTGCGCGCG
GAAGGCTATG AGCTGACCAA GACCCACCAG GGCGCGGACC TCGTGGTGGT GAACACCTGC
GGCTTCCTCG ACAGCGCCAA GGCGGAAAGC CTCAATGCCA TCGGCGAGGC GCTGGCCGAG
AATGGCAAGG TGGTGGTCAC CGGCTGCATG GGCGCCGAGC CCGAGCAGAT CCGCGAGGTC
CACCCGAGCG TCCTCGCCAT CACCGGCCCG CAGCAATACG AGAGCGTGCT CGCCGCCGTG
CACGAGGCGG TGCCGCCGGC CCACGATCCC TTCCTCGACC TCGTGCCCGC CGAGGGCGTC
AAGCTCACGC CCCGCCACTA TGCCTATCTC AAGATTTCCG AGGGCTGCTC CAACCGCTGC
ACCTTCTGCA TCATCCCCAA GCTGCGCGGC GACCTGGTCT CGCGCCCGGC GGGGGACGTG
CTGCGGGAGG CCGAGCGGCT GGTGAAGGCG GGCGTGAAGG AACTGCTCGT CATCTCGCAG
GACACCTCCG CCTATGGCGT TGACCTGCGC TACGCCACCA GCCCGTGGGG CGACAAGGAA
GTCGCCGCCC GCTTCCTGGA TCTGGCCGGC GCGCTGGGGG ACCTCGGCGC ATGGGTGCGC
CTGCACTACG TCTACCCCTA CCCGCACGTG GATGCGGTGA TGGAGTTGAT GGCCGCCGGC
AAGGTGCTGC CCTATCTCGA CATCCCGTTC CAGCATGCCA GCCCCACCGT GCTGAAGCGC
ATGAAGCGCC CGGCCTCGCA GGAAAAGACG CTGGCCCGCA TCCAGGCGTG GCGCGCGGCG
GTGCCGGACC TCACGCTGCG CTCCACCTTC ATCGTCGGCT TCCCCGGCGA GACCGAGGCG
GAGTTCGAGG AACTGCTCGG CTTCCTCGAA GAGGCGGAGA TCGACCGCGC CGGCTGCTTC
AAGTTCGAGC CGGTGCGCGG GGCCGATGCC AATGCGCTGG AAAACCCCGT GCCCGACGCG
GTGAAGGCAG AACGCTACGA CCGCTTCATG CGCACCCAGC AGAAGGTTTC CGCCCGGCGC
CTGAAGCGCA AGGTGGGCAC CCGCCAGAGC GTGATCATCG ATACCGTGAC GCCCGACGGC
GGCATCGGCC GCACCAAGGG CGACGCGCCG GAGATCGACG GCACGGTGAA GGTGTTCGCC
CGCCGTCCGC TGCGCGTGGG CGAGATCGCC ACCGTGAAGA TCGAGGCGGC CGGGCCTTAC
GACCTCTCCG GCACCGCCGT GGGGTTCTGA
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| Protein sequence | MADTVLNSAP SKAAPRISFV SLGCPKALVD SERIVTRLRA EGYELTKTHQ GADLVVVNTC
GFLDSAKAES LNAIGEALAE NGKVVVTGCM GAEPEQIREV HPSVLAITGP QQYESVLAAV
HEAVPPAHDP FLDLVPAEGV KLTPRHYAYL KISEGCSNRC TFCIIPKLRG DLVSRPAGDV
LREAERLVKA GVKELLVISQ DTSAYGVDLR YATSPWGDKE VAARFLDLAG ALGDLGAWVR
LHYVYPYPHV DAVMELMAAG KVLPYLDIPF QHASPTVLKR MKRPASQEKT LARIQAWRAA
VPDLTLRSTF IVGFPGETEA EFEELLGFLE EAEIDRAGCF KFEPVRGADA NALENPVPDA
VKAERYDRFM RTQQKVSARR LKRKVGTRQS VIIDTVTPDG GIGRTKGDAP EIDGTVKVFA
RRPLRVGEIA TVKIEAAGPY DLSGTAVGF
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