| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4353 |
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| Symbol | |
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| ID | 5424662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4823933 |
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| End bp | 4827094 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640883615 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001419231 |
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| Protein GI | 154248273 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.703166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCCT CCGTCTTCGT CGACCGCCCG CGGCTCGCCA TCGTCATCGC CATCGTCACG
ACGATTGCCG GCCTGCTCTC GCTGCTGGCC ATCCCGGTGG CGCAGTATCC GGATATCATC
CCGCCGCAGG TGTCGGTGAC CACCGCCTAT CCCGGCGCCT CCGCCGAGGT GGTGGATTCC
ACCATCGCCC AGCCCATCGA GGCCCAGGTG GTGGGCGTAG ACAAGCTCAT CTACATGAAG
AGCGTGTCCG GCGATGACGG AAGCTACACG CTCACCGGCT CGTTCGAGCT GGGCACCGAC
CCGGACATCA ACACCGTCAA CATGAACAAT CGCGTCCAGG TGGCGCAGTC CAAGCTGCCG
GAGGATGTGA AGCGCCAGGG CGTGGTGGTG AAGAAGAAGT CGTCGGCGCT GCTTGGCGTG
CTGGCCATTT CCTCACCAAA GAAGACCTGG GACCCGCTCT ATATCTCCAA CTACGTCACG
ATCAACATTC TCGACGAGCT GAAGAGCATT CCGGGCGTCG GCGATGCCGC GCTCTGGGGT
CCGCAGGACT ATGCCGTCCG GGCCTGGGTG AAGACCGACC GGCTCACCGG CCTCGGCCTC
ACCACCCAGG ACATCGTCGC CGCCATCCGG GGCCAGAACA TCCAGGCGGC GGTGGGCCGC
ATCGGAGCAC GACCGGTCTC CGACGACCAG CAGTTGCAGC TGAACCTGCG TACCAAGGGT
CGGCTGTCCA GCATCGAGGA ATTCGAGAAG ATCGTCCTGC GCACCAACGA GGACGGCTCG
GTGCTGCGCC TCGGCGACGT GGCGCGGCTC GAGCTGGGCG CAGCCAACCT CGACCGTGAG
ACCCTGTTCA ACGGCGGCCC GGCGGCGGTG CTGGCGCTCT ACCAGTCGCC CGGCGCCAAC
GCCATCACCA CCATCAACGC CGTGCGCAAG CGCATGGATG AGCTGTCGAA GGCCTTCCCC
GAGGACCTCG CCTGGAAGGT CACCTACGAC CCCACCTCGT TCGTGGTGGA GACCATCCAC
GAGGTGCAGA AGACCCTGAT CGAGGCGTTC ATCCTCGTGG TGCTGGTGGT CTACCTCTTC
CTCGGCAGCT TCCGGGCGAC CCTGATCCCG ACGCTCGCGG TGCCGGTAAG CCTCATCGGC
ACCTTCATCG TGCTCAACGC CATCGGCTAT TCGGCGAACT CGGTGTCGCT GCTGGCCATC
GTGCTCGCCA TCGGCATCGT GGTGGATGAC GCCATCGTGG TGGTGGAGAA TGTCGAGCGC
GTGATGGAGG AGCATCCCGA GTTCACCCCC GCCGAGGCCA CCAAGCGGGC CATGGCGGAA
ATCACCGCGC CCATCATTGC CATCACCCTG GTGCTGCTCT CCGTGTTCGT GCCGGTGGCC
TTCATTCCCG GCATCTCCGG CGAGCTGTTC CGGCAGTTCG CTGTGACGGT GGCGGTGGCC
ATGTTCCTCT CGGCCATCAA CGCGCTCACC CTTTCGCCGG CGCTCTGCGC CATCCTGCTG
AAGCCTTCCC ACGGGCCGAA GAAGGGCCCC ATCGGCTATG TGATGCGCGG CATCGACAAG
GTACGCGATG CCTATGGCGC GGCGGTGGCG CGCCTCGTTC GCTTCTCGCT CATCGGTCTG
GTGTGCGTGT TCGTGGCGTC CGGCGGCATC TTCGCCCTGT CCAAGATGAC CCCCACCGGC
TTCCTGCCCG AGGACGACCA GGGCGCCTTC TTCGTGGTGG TGCAATTGCC TGGTGGGGCT
TCCGTGGGCC GCACCACGGA GGTGATCCGC AAGGCCGAGG CGCTGTTGAG AGAAGAGCAC
ACGGTGGAGG ACTTCACCTC CGTCATCGGC CTCAACTTCA TCGACAATTA TTCCCAGCCC
AACGCCGCCT TCATCGTCGT CACGCTGAAG CCGTTCGAGG AGCGGCATGG CGCGGAGAAC
GGCGCCGCCG CCATCCTCGC CCGGCTCGGG CCGAAGATGC GCGCCATCTC CGGCGGCTCC
GTCGTGCCGC TGGGACCGCC GCCCATCGTT GGCCTCGGCA CCGGCGGCGG CTTCAGCTTC
GTGCTGCAGG ATCTGCGGGC AGGGGACCCG AAGGCGCTGG CGCAGGTGCT GCGCGGCCTG
CTGGTGGCCG CCAACCAGGA CCCGCGCCTG ACCCGCGTGT TCTCCACCTA TTCCGCGTCC
AACCCCTCGA TCCAGCTCGA CATCGACCGG GACAAGGCCC AGGTGCTCGG GGTGCCGCTG
GACAGCGTGT TCCAGGCGCT CCAAACCTCG CTGGGCGGGC TCTATGTGAA CGACATGAAC
CTCTACGGCC GCACCTGGCA GGTGCAGGTG CAGGCGGAGG CGGAGGATCG CAAGAGCATC
GACGACATCT ACCGCATCCA TGTGCGCAAC GACAAAGGCG AGATGATCCC GCTGCGCTCT
ATCGTCGAGG TGCGGGTGGA GATCGGCCCG CCGGCGTTGA TCCGCTACAA CAACAAGCGG
GCGGTGACAG TGCAGGGCGC GCCGGCGGAA GGCGTCTCTT CCGGCCAGGC GCTCGCCGCC
ATGGACGAGG TGGCAGCCAA GACCCTGCCG CAGGGCTTCT CCGGCGCGTG GACGGACACC
TCGTTCCAGG AGAAGCGGGC GGAGGGCAAG ACCGGGATCA TCCTCGCCTT CGCCGTGCTG
TTCGCCTTCC TGTTCCTGGT GGCGCTGTAT GAGAGCTGGT CGATCCCGGT GCCGGTGCTG
CTCTCGGTCA CCGTGGGCAT GCTCGGGGCG TTCGCGGCCA TCGTCGTCGG CCGGCTCACC
CTCGACCTCT ACGGGCAGAT CGGCATGATC GTGCTGATCG GCCTCGCGGC CAAGAACGGC
ATCCTCATCG TCGAGTTCGC CAAGGAGCGG CGCGAGCACG GGGAGGATCT GCTGCAGGCC
GCCACCGAGG GCTCCCGGCT CAGGTTCCGT CCGGTGATGA TGACCTCGCT CGCCTTCATC
CTCGGCCTCT ACCCGCTGGT GGTGGCGACG GGGGCGGCGC AGATGGCGCG GCAGAACGTG
GGCACGCCGG TGTTCGGCGG CATGATCGCC GCGTCCTTCC TCGGCATCTT CGTCATCCCT
CCGCTCTATG TGCTGTTCCA GGGCATCCGC GAGAAGCTGC GCCCCGGCTC CCGGCCGAAG
GTGCAACCGA CGCCGGATGC ACCCGCCGCT CATGGGGAGT GA
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| Protein sequence | MLSSVFVDRP RLAIVIAIVT TIAGLLSLLA IPVAQYPDII PPQVSVTTAY PGASAEVVDS
TIAQPIEAQV VGVDKLIYMK SVSGDDGSYT LTGSFELGTD PDINTVNMNN RVQVAQSKLP
EDVKRQGVVV KKKSSALLGV LAISSPKKTW DPLYISNYVT INILDELKSI PGVGDAALWG
PQDYAVRAWV KTDRLTGLGL TTQDIVAAIR GQNIQAAVGR IGARPVSDDQ QLQLNLRTKG
RLSSIEEFEK IVLRTNEDGS VLRLGDVARL ELGAANLDRE TLFNGGPAAV LALYQSPGAN
AITTINAVRK RMDELSKAFP EDLAWKVTYD PTSFVVETIH EVQKTLIEAF ILVVLVVYLF
LGSFRATLIP TLAVPVSLIG TFIVLNAIGY SANSVSLLAI VLAIGIVVDD AIVVVENVER
VMEEHPEFTP AEATKRAMAE ITAPIIAITL VLLSVFVPVA FIPGISGELF RQFAVTVAVA
MFLSAINALT LSPALCAILL KPSHGPKKGP IGYVMRGIDK VRDAYGAAVA RLVRFSLIGL
VCVFVASGGI FALSKMTPTG FLPEDDQGAF FVVVQLPGGA SVGRTTEVIR KAEALLREEH
TVEDFTSVIG LNFIDNYSQP NAAFIVVTLK PFEERHGAEN GAAAILARLG PKMRAISGGS
VVPLGPPPIV GLGTGGGFSF VLQDLRAGDP KALAQVLRGL LVAANQDPRL TRVFSTYSAS
NPSIQLDIDR DKAQVLGVPL DSVFQALQTS LGGLYVNDMN LYGRTWQVQV QAEAEDRKSI
DDIYRIHVRN DKGEMIPLRS IVEVRVEIGP PALIRYNNKR AVTVQGAPAE GVSSGQALAA
MDEVAAKTLP QGFSGAWTDT SFQEKRAEGK TGIILAFAVL FAFLFLVALY ESWSIPVPVL
LSVTVGMLGA FAAIVVGRLT LDLYGQIGMI VLIGLAAKNG ILIVEFAKER REHGEDLLQA
ATEGSRLRFR PVMMTSLAFI LGLYPLVVAT GAAQMARQNV GTPVFGGMIA ASFLGIFVIP
PLYVLFQGIR EKLRPGSRPK VQPTPDAPAA HGE
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