| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4278 |
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| Symbol | |
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| ID | 5423036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4744822 |
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| End bp | 4745973 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640883539 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001419156 |
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| Protein GI | 154248198 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.23466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0329516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGT CCCCCCTGTC CGCCCATCCC GTCACCTCGC CGGAGGACGA CGAGCGGTTC
ATGGCCGAGG CCCTGAAGGT GGGCCAGAGT GGGCTCGGGC GTACCTGGCC CAACCCCTCC
GTGGGCGCCG TGGTGGTGCA GCATGTGGAC GGCCGCCCGC ACATCGTCGG CGCCGCCGCA
ACCGCGCCCA CCGGCCGCCC CCATGCCGAG CCCATCGCCC TTGCCCAGGC GGGGGAGGCG
GCGCGGGGCT CGACGCTTTA TGTGACGCTG GAGCCCTGCT CCCACCACGG CCGCACCCCG
CCCTGCGCCG GCGCGGTGAT CGCCGCAGGA GTGCGCCGGG TGGTGGCCGC CATCGAGGAC
CCGGACCACC GGGTAAAGGG GCGCGGCGTC GCCCGCCTGC GCGCCGCCGG CATCTGGGTG
ACGGTGGGGG TCGGCGCCGA GCAGGCGCTG GCCGACCACG CCGGCCATAT CCGCCGCGTC
ACCGAAGGCC GGCCCCATGT GCTTTTGAAG ATGGCGGTTT CCGCCGACGG CAAGGCCGCT
CTCGCCGGGC CCCGGCCGGC GGTGGTCACC GGACCCGAAG CGCGGGCGAG GGCCCATCTC
ATGCGCGCCC ATGCGGACGC CATCCTGGTG GGCCTGGGTA CCGTGACGGC CGACGATCCC
ATGCTCACCT GCCGGCTGGA AGGCCATGAG GACCGTTCCC CGGTGCGCCT CGTGCTCGAC
AGCGGGCTCG ATATTCCGCT TGAAAGCGCC CTGGTGCGTA CTGCCAGCGA TGTCCCGGTC
TGGGTGATCG CGGCGGAGGA TGCCCCGGCC GAGCGCGCCG CCGCCCTCAT GGAACGCGGC
GTGGAAGTGC TGCGCGCCCC GCGTGGCGGC ATCGAGGGGC GGTTGCACCT GCCGGCGGTG
CTCAAGCTCT TGGGCCTTTT GGGCATCACC CGGCTGATGG TTGAGGGCGG CCCCGCCACC
GCCGCCGCCT TCCTGGAGGC GGGCCTGGTG GACGAGGTGG CGGTGTTCCA CAGCCCGGTG
CTGCTGGGGC CGGATGCCTA TCATGCGCTG GCCGGCCGTC CGCTCGGCCG CCTTTTCGCC
CCCGTGGGCT TCGCCGAGGT GGAGCGCGCC GAGCTTGGCG CCGACCGCCT CGTGCGCTTG
TGGAGACGCT GA
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| Protein sequence | MSVSPLSAHP VTSPEDDERF MAEALKVGQS GLGRTWPNPS VGAVVVQHVD GRPHIVGAAA
TAPTGRPHAE PIALAQAGEA ARGSTLYVTL EPCSHHGRTP PCAGAVIAAG VRRVVAAIED
PDHRVKGRGV ARLRAAGIWV TVGVGAEQAL ADHAGHIRRV TEGRPHVLLK MAVSADGKAA
LAGPRPAVVT GPEARARAHL MRAHADAILV GLGTVTADDP MLTCRLEGHE DRSPVRLVLD
SGLDIPLESA LVRTASDVPV WVIAAEDAPA ERAAALMERG VEVLRAPRGG IEGRLHLPAV
LKLLGLLGIT RLMVEGGPAT AAAFLEAGLV DEVAVFHSPV LLGPDAYHAL AGRPLGRLFA
PVGFAEVERA ELGADRLVRL WRR
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