Gene Xaut_4227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4227 
Symbol 
ID5422863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4686758 
End bp4687984 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content69% 
IMG OID640883486 
Producthypothetical protein 
Protein accessionYP_001419105 
Protein GI154248147 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.405326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.650749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCT GGCTGCCGTT CGAATGGATC GCCGCCCTGC GCTTCCTCGG CGAAGGGCGC 
ATGCAGACCG CCTTCATCCT CGGCGGCATC ACCATCGGCG TGGGCGTGAT CGTGTTCATG
TCGGCCATGC TGGCCGGGCT CCAGACCAAT TTCATCAAGC GGGTGCTGAC CTCCCAGCCG
CAGATCCAGC TGCTGCCGCC GGAGGAGGTG GCGCGTCCGC TGCGCTTCGA TCCGGGCGTG
ATCGAGGGCG CGCTGGTGCA GAAGCCGTCC CAGCGCATTC TCTCCATCGA CCAGTGGCAG
TCCATCGCTG TCGCCATGCG GGCGCGGCCT GACGTGGTGG TGGTGGCACC CACGGCGTCG
GGATCGGCCC TCGCGGTGCG GGGCGACGCC AGCCGCTCCA TCTCCATCAC CGGCATGGAG
CCGGAGCAGT ATTTCCGCAT CGTGCGGGTG CCCGACTATC TGGTGGCGGG GGAGGCGCGC
CTCGGCACCG ATGACATTCT CGTCGGCACC GAGCTGGCGA AGGACCTGGG CGCTGGCGTG
GGCGACAAGC TCAACGTGAC CACGGCTAAC GGGAGCGGGC GCATCCTCAC CATCACCGGC
ATCTTCGATT TCGGCAACAA GGCGGCCAAC GGGCGCAACA CCTATGTGGC CCTGCGCACC
GCCCAGAGCC TGCTCAACCT CATCGGCGGC GTCACCACCA TCGACATGAC GGTGACCGAC
ACCTACGCCG CCGAGGACAT CGCCCGCGAC ATCGCCGCCG TGGTGCCGGT GGAGGCGGAC
AGCTGGATCA CCACCAACGC CCAGTTCTTC ACCGCGGTGC GGGCGCAGCA GACCTCCAAC
ACCCTGATCC GGCTGTTCGT GGGCATCTCG GTGGCGTTCG GCATCGCCGC CGTGCTGGTG
GTATCGGTGA TCCAGCGCTC CAAGGACATC GGCATCCTGC GCGCCATGGG CGCGTCCCGC
GGGCGGATCC TGCGGGTCTT CCTCATCCAG GGTGGAGTGC TGGGCCTCTT CGGCTCTCTG
CTGGGGTCGG CGGCCGGCGC CGGAGCGCTC ATCCTCTGGC ACCACCTGCT GCGGCAGGTG
GACGGCTCGG AGCTGTTCCC GCTGATCCTG GAGCCGAGCC TGTTCGTGGC CGCAGCGCTG
CTCGCCACCC TGACCGGCGT GGTCGCCGGC CTTGCCCCGG CGGTGCGCGC CGCCAGCATC
GATCCGGTGG AGGCGATCCG TGGCTGA
 
Protein sequence
MNRWLPFEWI AALRFLGEGR MQTAFILGGI TIGVGVIVFM SAMLAGLQTN FIKRVLTSQP 
QIQLLPPEEV ARPLRFDPGV IEGALVQKPS QRILSIDQWQ SIAVAMRARP DVVVVAPTAS
GSALAVRGDA SRSISITGME PEQYFRIVRV PDYLVAGEAR LGTDDILVGT ELAKDLGAGV
GDKLNVTTAN GSGRILTITG IFDFGNKAAN GRNTYVALRT AQSLLNLIGG VTTIDMTVTD
TYAAEDIARD IAAVVPVEAD SWITTNAQFF TAVRAQQTSN TLIRLFVGIS VAFGIAAVLV
VSVIQRSKDI GILRAMGASR GRILRVFLIQ GGVLGLFGSL LGSAAGAGAL ILWHHLLRQV
DGSELFPLIL EPSLFVAAAL LATLTGVVAG LAPAVRAASI DPVEAIRG