| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4068 |
|---|
| Symbol | |
|---|
| ID | 5424499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 4502559 |
|---|
| End bp | 4503383 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640883323 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001418947 |
|---|
| Protein GI | 154247989 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGC TTACGGGCAA GGTCGCCTAT GTGACCGGGG CCGGCCGCGG CATCGGCCGG
GCCATCGCCC TGAAACTGGC GGGCGAAGGC GCGCGCCTCG TCCTCAACGA TCTGGACGCC
GAGCCGGTGG AGGCCGTCCG CGCCGAGATC CTGGCGCTGG GCGGCGAGGC CATCGCCGTT
CCCGGATCGG TGACGGCAGA GGGCTTCGCC CAGAGCTTCA TCGATCACGG CATCGCCGCG
TTCGATGGCA TCGACATCAT CGTCAACAAT GCCGGCTACA CCTGGGACAG CCTGATCGGC
AAGATGAGCG ACGCGCAGTT CGACGCCATC CTCGACGTGC ATCTGAAGGC GCCGTTCCAG
ATCCTGCGCG CCGCCGCCGA GCCGATCCGC ATCCGCGCGG CGCAGGAGGC CGCCGAAGGC
CGCGAGGTGT TCCGCAAGGT GGTGAACATC TCCTCCATCG CCGGCACCGG CGGCAACATG
GGCCAGGCCA ACTACGCCTC CGCCAAGGCC GGAATCATCG GCCTCACCAA GACGCTGTCG
AAGGAATGGG GGCGCTTCAA GGTGAACGTG AACTGCGTCG CCTTCGGTCT CATCGAGACC
CGCATGACGG CGGCCTCCGA GACCAAGGCC TCCATCACCG TGGAGGGCAA CCAGGTGGCC
ATCGGCCTGC CGCCCAAGGT GCTGGACGGC TTCCGAAGCC TCATCCCGCT GGGTCGCGCC
GGCACGCCAC AGGAAGCCGC CGACGGCGTC TATCTCTTCT GCGCGCCGGA ATCCAACTAT
GTGAGCGGAC AGGTGCTGGT GGTCGGCGGC GGTATTTCTT TCTGA
|
|---|
| Protein sequence | MTKLTGKVAY VTGAGRGIGR AIALKLAGEG ARLVLNDLDA EPVEAVRAEI LALGGEAIAV
PGSVTAEGFA QSFIDHGIAA FDGIDIIVNN AGYTWDSLIG KMSDAQFDAI LDVHLKAPFQ
ILRAAAEPIR IRAAQEAAEG REVFRKVVNI SSIAGTGGNM GQANYASAKA GIIGLTKTLS
KEWGRFKVNV NCVAFGLIET RMTAASETKA SITVEGNQVA IGLPPKVLDG FRSLIPLGRA
GTPQEAADGV YLFCAPESNY VSGQVLVVGG GISF
|
|---|
| |