| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3991 |
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| Symbol | |
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| ID | 5423885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4419880 |
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| End bp | 4421124 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640883246 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001418871 |
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| Protein GI | 154247913 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0367583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.111143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA TCGAACCCGG GAAGGAGACA GGGCCGGAGC TGAGCGGTGA TGACGGCGCT
CGGCCACTGA CGGGGGAGAC TGTGTCGGCC ATGCGGCTGC GGCCGGAACC GCCGCGGGTG
ACCCGCCTGT CCCGAAAGGT ATTAGCCGGG CTGGGGCTCG TTGCCGGCCT TGGGATCGGC
GGGGCGCTGA TCTACGCCCT GCAAGCGCGA AAGGACCACG GACACGGCCA GGAACTCTAC
GCCACCGACG TCAAGGCGAC GCCGGACGGG CTCGCCGGCC TACCCAAGGA TTACACCGGC
ATCCCCAAGC TCGGGCCTCC GCTGCCCGGC GACCTCGGCC GGCCGATCCT CAATGCGCAG
ACGGCAGTGC AGCCGACGGT GCCGACAATG GGAGGCATGC CAAATCCCGC CTTGAGCCCC
GAGGAGCAAC GCCAGCAGCG GGAAAGCGAA GACGCCCGGA CCGGACGGCT GTTCGCTCAG
ACCAATACCC GGTCGGCAAG CCCGGCGGTG ACCCAGCAGG CGGGAGTCAC TTCAGCGTCA
GCGGCGCCGG CCGCCGATCT CACCAGCCTC GGCCTTGCGC CGCAGGCGGC GACGCCGACG
GCCCAGGAGC GCCAGCTTGC CTTCCTGAGC CAGGCCGTGG ACCGGCGCAC CGTGTCGCCC
GACCGCGTGG CGGCTCCTGC CTCCGCCAAC ATCCTGCAGG CCGGCGCCGT CATCCCCGCG
GCGCTGATCA CCGGCATCCG CTCGGACCTG CCGGGCCAGA TCACCGCCCA GGTGACCGAG
AATGTCCACG ATAGCCCGAC CGGGCGGATC CTCCTGATCC CCCAGGGCAC ACGCATCATT
GGCCAGTATG ACAATGGCGT CGGCTTCGGG CAGCGCCGGG TGCTCCTCGT CTGGAACCGC
CTGATCTTCC CCAATGGCCG GTCCATCGTG CTGGAGCGCC AGACCGGAGC CGACGCGGAA
GGCTACGCTG GCCTTGAGGA TGGCATCGAC TACCATTGGG GCGAGCTGTT CAAGGCGGCG
GTGCTCTCGA CCATCCTCAG CGTCGGGGCG AGCGCAGGAA CGTCCGGCAG CGATAGCGAC
CTCGTGAGTG CTTTGCGGGA AGGCGCATCC GACAGCATCA GCCAGACCGG CCGGCAGCTC
GTCCAGCGCC AGCTCAACAT TGCGCCGACC CTCACGATCC GGCCGGGATT CCCGGTGCGG
ATCATCGTCA CGCGCGACCT CGTTCTTGAA TCCTATGGAG GTTGA
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| Protein sequence | MSGIEPGKET GPELSGDDGA RPLTGETVSA MRLRPEPPRV TRLSRKVLAG LGLVAGLGIG
GALIYALQAR KDHGHGQELY ATDVKATPDG LAGLPKDYTG IPKLGPPLPG DLGRPILNAQ
TAVQPTVPTM GGMPNPALSP EEQRQQRESE DARTGRLFAQ TNTRSASPAV TQQAGVTSAS
AAPAADLTSL GLAPQAATPT AQERQLAFLS QAVDRRTVSP DRVAAPASAN ILQAGAVIPA
ALITGIRSDL PGQITAQVTE NVHDSPTGRI LLIPQGTRII GQYDNGVGFG QRRVLLVWNR
LIFPNGRSIV LERQTGADAE GYAGLEDGID YHWGELFKAA VLSTILSVGA SAGTSGSDSD
LVSALREGAS DSISQTGRQL VQRQLNIAPT LTIRPGFPVR IIVTRDLVLE SYGG
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