Gene Xaut_3965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3965 
Symbol 
ID5423503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4388197 
End bp4389015 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content67% 
IMG OID640883221 
Productphosphonate ABC transporter, inner membrane subunit 
Protein accessionYP_001418846 
Protein GI154247888 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3639] ABC-type phosphate/phosphonate transport system, permease component 
TIGRFAM ID[TIGR01097] phosphonate ABC transporter, permease protein PhnE 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.692533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTCA TAGCCCTCCC CGAAGGCCGC CGGTCCTGGC AACGGCGCAC TTCGCGCGGC 
CAGATCGCCG TGTGGTTCGG CTGGCTTCTC GCCGTGGCCT TCACCGTGTT CTGCTGGCGG
GTGATGACGG AAGGCACCAT CTGGGCCTTC GTCTGGGATG CCCCCACCCA GGCCGCCGAC
ATCGGCGCGC GCATGGTCCC GCCGCGCTGG TCCTATTTCC CGGCACTGCT CAAGCCGCTT
TGGGACACGC TCAACATTGC CACCCTCGGC ACGCTCATCG CCATCGTGCT GTCGGTGCCG
GTGGCCTTCC TCGCGGCACG CAACACCACG CCTAGCGCCG CCTTCGTGCG GCCGCTGGCG
CTGTTCGTCA TCGTCGCCTC GCGCTCCATC AATTCCATCA TCTGGGCGCT GCTGCTGGTG
GCGATCCTGG GTCCGGGCGT GCTGGCCGGC ATCATCGCCA TCGCGCTCAG GTCCATCGGC
TTCATCGGCA AGCTGCTCTA CGAGGCCATC GAGGAAATCG ACGAGAGCCA GGTGGAGGCG
ATCCGCGCTA CCGGCGCCTC GGGCGCCCAG ACCCTCGCCT ACGGGATCGT GCCGCAGATC
ATGCCCGCCT TCGCCGGCAT CAGCGTGTTT CGCTGGGACA TCAACATCCG CGAATCCACG
GTGCTCGGCC TGGTTGGCGC GGGCGGGATA GGACTCAACC TGGAAAGCTC GCTCAATACG
CTGGCGTGGC CGCAGGTGAC GCTGATCCTC ATGGTGATCC TCGCCACCGT GGTGGTGAGC
GAATGGGTGT CCGCCAAGGT CCGCCACGCC ATCATCTGA
 
Protein sequence
MPVIALPEGR RSWQRRTSRG QIAVWFGWLL AVAFTVFCWR VMTEGTIWAF VWDAPTQAAD 
IGARMVPPRW SYFPALLKPL WDTLNIATLG TLIAIVLSVP VAFLAARNTT PSAAFVRPLA
LFVIVASRSI NSIIWALLLV AILGPGVLAG IIAIALRSIG FIGKLLYEAI EEIDESQVEA
IRATGASGAQ TLAYGIVPQI MPAFAGISVF RWDINIREST VLGLVGAGGI GLNLESSLNT
LAWPQVTLIL MVILATVVVS EWVSAKVRHA II