| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3938 |
|---|
| Symbol | |
|---|
| ID | 5423363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4360773 |
|---|
| End bp | 4362452 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640883194 |
|---|
| Product | YidE/YbjL duplication |
|---|
| Protein accession | YP_001418819 |
|---|
| Protein GI | 154247861 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2985] Predicted permease |
|---|
| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACT TCGTCGGAAC GCTCCAAAAG TATCCGGAGA TTGCGCTTTT CCTGACCATC
GGCATCGGAT TCTGGATCGG GAATCTGAAG CTTGGAAAAT TCAATCTCGG CGTCGTCACC
AGCACCTTGC TGGCCGGTCT TCTCGTCGGG CAGATCGGCA TCAAGCTGCC CGCCGTCATG
CAGTCCACCT TCTTCGCCAT GTTCCTGTTC TCGGTGGGCT ATGCGGTGGG CCCGCAGTTC
ATCCGCGCGC TGAAGAGCGA TGGCCTGCCC CAGGTGGTGT TCGCCATCCT GATCTGCCTT
GCCGGCACGG TGACGGCGAT CGTCCTTGGC AAGCTGCTCG GCTACAACGC CGCGCTCACC
GCCGGCCTGC TGTCGGGCGG CTACACCAAC TCGACGGTGC TCGGTGTGGC GGCCGACCTC
ATGAACCAGT CCGGCCTTCA GCCGGACGAG CTGAAGGCGG CGCTGGCGCT GCTGCCGGTG
GCCTATGCGG TGACCTATCC GTTCGGCACC ATCGGCTCGG CCTTCATGCT CGCCAACATT
GCGCCCAAGG TGCTCGGCTT CGACCTCGTG AAGGTGTGCC AGGACTATGA GCGCGAGCAC
GGCGGCAACA AGATCGGCAC CACGGCCTAT CGCGAATTCT CGGCCCGCGC CGTCAAGCTC
GCAAACACCG GCCTGGTGGG CAAGACGGTC GAGGACGTGG AGAAGATGTT CCACAACGAG
ATCTTCATCC GCCGCATGCG CACCTCTGCC GAGGGCCCGA TCGTCGACTG CAAGCGCGAT
ACGGTGCTGA CGGAAGGAGC GATCCTCGCC GTCTCCGGCG GCCTGTCGGC CCTTCTCGCC
TATGCCGATG AGTTCGGCCC CGAGCTGAAG GACGTGCCGC TGCTCGACTT CTCGACCGAG
TTGCTCGACC TCGTGGTCAC CAACAAGGCC TATGCCGGCA AGACCCTGGG CGAATTGATC
CACACCCTGT TCGGCGAGCC CGGCCGAGGC GTGTTCCTCA CCAAGTTCAC CCGCTCGGAT
GTGGCCATGG CCATGGGCGA GCAGGTGAAG GTGCAGCGGG GCGACGTGCT CACCATCCTT
GGCGCCAAGG CGGACGTGGC CAAGATCGCC AAGGTGCTGG GCTATGCCGA CCGTCCCGTG
GAAGGCTCGG ACATGGCGTT CATGGCCTTC GGCATCGTGT TCGGCAGCCT CATCGGGGCC
TTCACGATCC GCATCGGCGG CATCCCGCTG TCGCTGGGCA CCGCCGTGGG CGCCATCGTG
GCCGGCATCA TTTGCGGCTA CCTGCGCTCC ACCATGCGCA CCTTCGGCCA CATCCCCGGG
CCGGCCATCT GGGTGTTCAA CAATGTGGGC CTCAACGGCT TCATCGCCTG CATCGGCCTC
AACGCGGCGC TCGGCTTCGT GGGTGGTATC CAGAACTACG GCCTCACCCT GTTCCTGGCC
GGCACCCTTG TGACCCTAGT TCCGATCATC GTCGGCCTGC TGCTCGGACA CTTCGTGTTC
AAGTTCCACC CCGGCATCAT GCTCGGCGCC GTGGCCGGTG CCCGCTCCAC CACGGCGGCC
CTCGGCGCGC TGCAGGAAGC CTCCAAGAGC AACGTCCCGG TGGTGGGCTA TGCCACCGGC
TACGCGGTCT CCCGCCTGGT GATGGCGCTT TTGACCATCG TGGTGGTCAA CGCCTTCTGA
|
|---|
| Protein sequence | MNYFVGTLQK YPEIALFLTI GIGFWIGNLK LGKFNLGVVT STLLAGLLVG QIGIKLPAVM
QSTFFAMFLF SVGYAVGPQF IRALKSDGLP QVVFAILICL AGTVTAIVLG KLLGYNAALT
AGLLSGGYTN STVLGVAADL MNQSGLQPDE LKAALALLPV AYAVTYPFGT IGSAFMLANI
APKVLGFDLV KVCQDYEREH GGNKIGTTAY REFSARAVKL ANTGLVGKTV EDVEKMFHNE
IFIRRMRTSA EGPIVDCKRD TVLTEGAILA VSGGLSALLA YADEFGPELK DVPLLDFSTE
LLDLVVTNKA YAGKTLGELI HTLFGEPGRG VFLTKFTRSD VAMAMGEQVK VQRGDVLTIL
GAKADVAKIA KVLGYADRPV EGSDMAFMAF GIVFGSLIGA FTIRIGGIPL SLGTAVGAIV
AGIICGYLRS TMRTFGHIPG PAIWVFNNVG LNGFIACIGL NAALGFVGGI QNYGLTLFLA
GTLVTLVPII VGLLLGHFVF KFHPGIMLGA VAGARSTTAA LGALQEASKS NVPVVGYATG
YAVSRLVMAL LTIVVVNAF
|
|---|
| |