| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3914 |
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| Symbol | |
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| ID | 5422766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4331621 |
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| End bp | 4334326 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640883170 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001418795 |
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| Protein GI | 154247837 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.445243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTCG TCATCGTCGA ATCGCCGGCT AAGGCGAAGA CGATCAACAA ATATCTCGGT
CCCGGCTACG AGGTGATCGC CTCCTACGGC CACGTGCGCG ACCTGCCCTC CAAGGATGGC
TCCGTCGACC CCGATGCGGA TTTCCGCATG CTGTGGGAGG TGGACCCCAA GGCGCAGAAG
CGGCTGAACG AGATCGCCAC CGCAGTGAAG GGGGCCGACG GCCTCATCCT CGCCACCGAC
CCGGATCGCG AGGGCGAGGC CATCTCCTGG CACGTGCTGG AGGTGCTGAA GCAGAAGAAG
GCGCTCAAGG ACCAGAAGGT CGAGCGCGTG GTCTTCAACG CCATCACCAA GCAGGCCGTG
CTGGACGCCA TGAAGGCGCC CCGCGCCATC GACGTGGCGC TGGTGGACGC CTACCTCGCC
CGCCGCGCCC TCGACTATCT GGTGGGCTTC ACGCTCTCCC CGGTGCTGTG GCGCAAGCTG
CCCGGCGCCC GCTCGGCAGG CCGGGTGCAG TCGGTGGCGC TGCGCCTCGT CTGCGACCGC
GAGCGCGAGA TCGAAACCTT CGTCCAGAAG GAATACTGGT CCATCCTCGC CAGGCTCGCG
ACGCCCCGCG CCGAGGAGTT CGAGGCCCGC CTGACGGGCG CCGACGGCAA GAAGATCACC
CGCCTCTCCG TGGGCACGGC GGAGGAGGCC AAAGCCTTCC GCGCGGCACT GGAGGCGGCC
GACTTCCGCG TGCGCTCGGT GGAAGCCAAG CCCATGCGGC GCCATCCGCA GCCGCCCTTC
ACCACCTCCA CCCTGCAGCA GGAGGCCAGC CGCAAGCTGG GCCTTGCCCC CGCCCGCACC
ATGCAGATCG CCCAGCGCCT CTACGAGGGC GTGGATGTGG GCGGCGAGAC GGTGGGTCTC
ATCACCTATA TGCGAACCGA CGGCGTGGAC ATGGCGCCCG AGGCGGTGGC CGCCACCCGC
AGCGCCATCG GCAAGCAGTT CGGGCCAAAG TATCTGCCCG GGGTGCCGCG CAAATACACC
ACCAAGGCCA AGAACGCCCA GGAAGCCCAC GAAGCCATCC GCCCCACCGA CCCGTCGCGC
CATCCCCGCG AGGTGGCGCG CCATCTCGAT GGCGAGCAGG CCAAGCTCTA TGAGCTGATC
TGGATCCGCA CCGTGGCGAG CCAGATGGAA TCGGCGGAGC TGGAGCGCAC CACCGCCGAT
ATCGAGGCGA AAGCCGGCGG CCGCACCCTC GACCTCACAG CCACCGGCAC GGTGGTGAAG
TTTGACGGCT TCCTCACCCT CTATCGCGAG GGCAAGGACG ACGAGGACGA CGACGAGGAG
AGCCGCCGCC TGCCGGCCAT GAGCGCCAAC GAAAAGCTCA ACCGGCGCGA CATCCTCACC
ACCCAGCACT TCACCGAGCC GCCGCCGCGC TATTCGGAAG CCTCGCTGGT GAAGCGCATG
GAGGAGCTGG GCATCGGCCG GCCCTCCACC TATGCCGCCG TGCTCGCGGT GCTGCGCGAC
CGCGAATATG TGAAGCTCGA GAAGAAGCGC CTGGTGCCGG AGGACAAGGG CCGGCTCGTC
ACCGCCTTCC TCGAAAGCTT CTTCAAGCGC TACGTGGAAT ACGACTTCAC CGCCGATCTC
GAAGAGAAGC TGGACGAGGT CTCCGCCGCC GAACTCGACT GGAAGGAGGT GCTGCGCGCC
TTCTGGCAGG ACTTCCACAC CGCCGTGGAG GCCACCAAGG ACCTGCGCGT CTCCCAGGTG
CTCGACGCCC TGGACGAGAT GCTCACCGCC CACATCTTCC CGCCGACCCA GGACGGTTCC
GACCCGCGCC TGTGCCCCAC CTGCGGCAAC GGGCGGCTGT CGCTGAAGAT GGGCAAGTTC
GGTGCCTTCA TCGGCTGCTC GAACTATCCC GAGTGCCGCC ACACCCGCCC CCTCACCGGC
GACGGCGCCC CCGAGGGCGA CGGCAAGCGT GAGCTGGGCA TCGATCCAGA GAGCGGCGAG
GACGTGACCA TCCGCGCCGG GCGCTTCGGC ACCTATCTCC AGCTCGGCGA GGGCAAGGAT
GGGGAGAAGC CCAAGCGCTC CTCCCTGCCC AAGGGCCTCG CCCCGGCGGA CGTGGACCTG
GAAACCGCGC TGAAGCTGCT GGCCCTGCCG CGTGAGGTGG GCAAGCATCC CGAGGACGGC
GAGCCCATCC TCGCCGGCAT CGGGCGCTAT GGACCTTATG TGCAGCACGG GCGGACCTAC
GCCAACATCG AGGACGGCGA CGACATTCTC GCCATCGGCC TCAACCGGGC GGTGGTGCTG
ATCGCCGAGA AGCAGTCCAA GGGCCGCGGC GGGCGCGGGG CGGCGACGCC GGGGCGGACC
CTGGGCGATC ACCCCACCCT CGGCGGACCG GTCACGGTGC GGCCTGGCCG CTTCGGGCCT
TATGTGAACC ACGGCAAGGT CAACGCCACC CTGCCCAAGT CGGTGGATCC CGAAGCCCTC
ACCCTCGCCG AGGCGGTGAC CCTCATCGAC GCCAAGGCGG CCCTGTCGCC CTCCAAGGCG
AAGGCGCCCC GCAAGGCGGC CACCAAGGCG GCCGCATCCG GCGAGGATGC TCCGGCCAAG
GCGGCCACCA AGACGGCGGC GAAAAAGCCG GCGGCGAAAT CCGCCGCCAA GAAGACCGCG
ACGAAGCAGC CCGCCGCGAA GAAGACGACG AAGACCGCCA GCAAGGGGCC GAAGGCGGCC
GAATAG
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| Protein sequence | MQVVIVESPA KAKTINKYLG PGYEVIASYG HVRDLPSKDG SVDPDADFRM LWEVDPKAQK
RLNEIATAVK GADGLILATD PDREGEAISW HVLEVLKQKK ALKDQKVERV VFNAITKQAV
LDAMKAPRAI DVALVDAYLA RRALDYLVGF TLSPVLWRKL PGARSAGRVQ SVALRLVCDR
EREIETFVQK EYWSILARLA TPRAEEFEAR LTGADGKKIT RLSVGTAEEA KAFRAALEAA
DFRVRSVEAK PMRRHPQPPF TTSTLQQEAS RKLGLAPART MQIAQRLYEG VDVGGETVGL
ITYMRTDGVD MAPEAVAATR SAIGKQFGPK YLPGVPRKYT TKAKNAQEAH EAIRPTDPSR
HPREVARHLD GEQAKLYELI WIRTVASQME SAELERTTAD IEAKAGGRTL DLTATGTVVK
FDGFLTLYRE GKDDEDDDEE SRRLPAMSAN EKLNRRDILT TQHFTEPPPR YSEASLVKRM
EELGIGRPST YAAVLAVLRD REYVKLEKKR LVPEDKGRLV TAFLESFFKR YVEYDFTADL
EEKLDEVSAA ELDWKEVLRA FWQDFHTAVE ATKDLRVSQV LDALDEMLTA HIFPPTQDGS
DPRLCPTCGN GRLSLKMGKF GAFIGCSNYP ECRHTRPLTG DGAPEGDGKR ELGIDPESGE
DVTIRAGRFG TYLQLGEGKD GEKPKRSSLP KGLAPADVDL ETALKLLALP REVGKHPEDG
EPILAGIGRY GPYVQHGRTY ANIEDGDDIL AIGLNRAVVL IAEKQSKGRG GRGAATPGRT
LGDHPTLGGP VTVRPGRFGP YVNHGKVNAT LPKSVDPEAL TLAEAVTLID AKAALSPSKA
KAPRKAATKA AASGEDAPAK AATKTAAKKP AAKSAAKKTA TKQPAAKKTT KTASKGPKAA
E
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