| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3877 |
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| Symbol | |
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| ID | 5422391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4295630 |
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| End bp | 4297858 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640883133 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001418758 |
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| Protein GI | 154247800 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.296182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCC AATACGAACT CGTCGAGCGC GTTCGACGGT ATAATCCCAA CACCGACGAG
GCGCTGCTCG ACCGCGCCTA TGTGTATGCC ATGCGCGCGC ACGGCAGCCA GCTGCGCGCG
TCCGGCGACC CCTATTTCTC CCATCCCCTG GAAGTCGCGG CGATCCTCAC CGATCTCAAG
CTGGACGATG CCACCATCGT CTCGGCCCTG CTGCACGACA CCATCGAGGA TACGAGCGCC
ACCAAGGTGG AGATCGAGCG CCTGTTCGGT CACCAGATCG CGACGCTGGT GGAGGGCCTC
ACCAAGATCA AGAAGCTGGA CCTCGTCTCC AAGCAGGCCA AGCAGGCGGA AAACCTGCGC
AAGCTGCTCC TCGCCATCGC CGACGACGTG CGGGTGCTCC TCGTCAAGCT CGCCGACCGT
CTCCACAACA TGCGTACCCT GAAGTGGGTG CCGCCGGAGA AGCGCGATCG CGTGGCGCAG
GAGACGCTGG ACATCTACGC CCCGCTCGCC GCCCGCATGG GCATGCAGGA CATGCGCGAG
GAACTGGAGG ACCTGTCCTT CCGCCAGCTC TCGCCGGAGG CCTACGAATC CATCGCCGAG
AGGGTCTCGG AACTGCGCCA GGGCAACGGC GCCGTGGTGC AGGAGATCGA GCGCGAGCTG
AAGGACGAGC TGGAACGGCG CGGCATCGCG GCCGAGGTGA AGGGGCGTGA GAAGCGGCCG
TATTCCATCT GGGGCAAGAT GGAGCGCAAG GCCATCGGCT TCGAGCAATT GTCCGACCTC
TACGGCTTCC GCGTCATCGT CGGCTCGGTG GAGGACTGCT ATCGCGCTCT GGGGGTGATC
CACACCAAGT GGGCCATTGT GCCCGGCCGC TTCAAGGACT ACATCTCCAC CCCCAAGCCC
AACGACTACC GCTCGCTCCA CACCACGGTG GTGGGACCGC GCCGGCAGCG GGTCGAGATG
CAGATCCGCA CCCGGGACAT GGAGGAGATC GCCGAATACG GCATCGCCGC CCACGCCCTC
TACAAGGATG CGTCCGGCGC GCCGGGGGCC ATGCTCTCCC ACGAGAGCCG GGCCTACGCC
TGGCTGCGCA AGACCATCGA GAACCTGTCG CAGGGCCTCT CGCCGGAGGA GTTCCTGGAG
CACACCAAGC TCGAGCTGTT CCACGACCAG GTGTTCTGCT TCACCCCCAA GGGGCGGCTG
ATCGCGCTGC CGCGCAAGGC GACGCCCATC GATTTCGCCT ATGCCGTGCA TACCGACGTG
GGCAATACGG CGGTGGGCTG CAAGATCAAC GGCTCCATCG CGCCCCTGGT GTCGGAGCTG
AAGAACGGCG ACGAGGTGGA GATCATCACC TCCAAGGCGC AGACGCCGCC CGGCGCGTGG
GAGACCATCG CCGTCACCGG CAAGGCGCGG GCCGCCGTGC GCCGTGCGAC CCGCACCGCC
GTTCGCGCCC AATATGCCGG CCTCGGCCGC AAGATCGCCG AGCGGGCTTT TGCCAAGGCC
GGCAAGGTGT TCTCGGAGGA TGCGGTGGCC AAGGGCACGC CGCGCCTCGC CCGCACCGCC
GCCGAGGACG TGTTCGCCGC CGTGGGCCGG GGCGAGATCA AGACCGAGGA TCTCATCCGC
GCCGTCTATC CCGACTGGCA GCCGCCGCGC GCGGAAGACC GCACCGACCG TCAGATCAAC
GGCGAGGGCT GGTTCGAGCT GAAGCGCGGC CACAACCTCA AGTTCAAGAT CCCCGAGGGC
GCCAAACCGC GGGATGGGGA GGATGCCGAG CGTCTCGACG CCATTCCCAT ACGCGGCATC
AACGGTGAGC TTCCGGTGCG ATTCGCGCCG GAGGGCGGCG CCGTGCCTGG CGACCGCATC
GTCGGCATTC TCACGCCGGG GGAGGGGATC ACCATCTACC CGATCCAGTC GCCGTCCCTG
CAGAGTTTCG AGGATGCGCC CGAGCGCTGG CTCGACGTGC GCTGGGACGT GGACGAGCTG
TCGGATGGCC GCTTCCCGGC CCGCATCATC GTGACCGCCC GCAACGCACC CGGCTCGCTG
GCCCAGGTGG CCGGCGCCAT CGGCGATCGC GGCGGCAATA TCGACGGTCT CCAGATGCGC
TCCCGCTCGG CGGATTTCCA CGAGATGGTG ATCGACATCG AGGTGTTCGA CCTCAGGCAC
CTCAACACCA TCATGGCGGA CCTGAAGGCC CGCGAGGTGG TGGCCCAGGT GGAGCGCGTG
AACGGCTGA
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| Protein sequence | MMRQYELVER VRRYNPNTDE ALLDRAYVYA MRAHGSQLRA SGDPYFSHPL EVAAILTDLK
LDDATIVSAL LHDTIEDTSA TKVEIERLFG HQIATLVEGL TKIKKLDLVS KQAKQAENLR
KLLLAIADDV RVLLVKLADR LHNMRTLKWV PPEKRDRVAQ ETLDIYAPLA ARMGMQDMRE
ELEDLSFRQL SPEAYESIAE RVSELRQGNG AVVQEIEREL KDELERRGIA AEVKGREKRP
YSIWGKMERK AIGFEQLSDL YGFRVIVGSV EDCYRALGVI HTKWAIVPGR FKDYISTPKP
NDYRSLHTTV VGPRRQRVEM QIRTRDMEEI AEYGIAAHAL YKDASGAPGA MLSHESRAYA
WLRKTIENLS QGLSPEEFLE HTKLELFHDQ VFCFTPKGRL IALPRKATPI DFAYAVHTDV
GNTAVGCKIN GSIAPLVSEL KNGDEVEIIT SKAQTPPGAW ETIAVTGKAR AAVRRATRTA
VRAQYAGLGR KIAERAFAKA GKVFSEDAVA KGTPRLARTA AEDVFAAVGR GEIKTEDLIR
AVYPDWQPPR AEDRTDRQIN GEGWFELKRG HNLKFKIPEG AKPRDGEDAE RLDAIPIRGI
NGELPVRFAP EGGAVPGDRI VGILTPGEGI TIYPIQSPSL QSFEDAPERW LDVRWDVDEL
SDGRFPARII VTARNAPGSL AQVAGAIGDR GGNIDGLQMR SRSADFHEMV IDIEVFDLRH
LNTIMADLKA REVVAQVERV NG
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