Gene Xaut_3857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3857 
Symbol 
ID5420860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4274261 
End bp4275559 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content71% 
IMG OID640883113 
ProductDNA polymerase IV 
Protein accessionYP_001418738 
Protein GI154247780 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CCGGCTTTTG CCGCGATTGC CTGTGCGATG CGCCCCAGAC AGGTGGCCTT 
GCCGGCGACC GCTGCCCGGC CTGCGGCAGC CCTCGCCTGC TGCGGCATCG GGAGCTGGAC
ACCCTCAGCG TCGCTCATGT GGATTGCGAC GCCTTCTTCG CCGCCGTGGA AAAGCGCGAC
GACCCGAGCC TTGCCGACGT GCCACTCATC ATCGGCGGCG GCAAGCGCGG GGTGGTCTCC
ACCGCCTGCT ACATCGCGCG CATCAAGGGC GTGCGCTCGG CCATGCCCAT GTTCAAGGCG
CTGGCGCTCT GCCCCGAGGC GGTGGTGCTG AAGCCGAACA TGGAGAAATA CCGCACGGTG
GGACGGCAGG TGCGGGCCAT GATGCAGCAG CTCACCCCGC TGGTGGAGCC GCTCTCCATC
GACGAGGCCT TCCTCGACCT TTCGGGCACG CAGGCGCTGC ATGGCGCCAG CCCCGCCCGC
ACGCTGGCGC GATTCGCGCA GGCGGTGGAG CGGGAGGTGG GCATCACCGT CTCGGTGGGG
CTCGCGGCCA ACAAGTTCCT CGCCAAGATC GCCTCCGACC TCGACAAGCC GCGCGGCTTC
TCGGTGCTGG GGCAGACGGA GGCGGCGGGC TTCCTCGCGC CGCGCCCCGC CACCTTCATC
TGGGGCGTGG GGGCGGCGTT CGGCGGCAAG CTGGCGAAGG ACGGCTTCCA CACCATCGCC
GACCTCCAGC GCGCCGCCCC CGCCGACCTT GCCCGGCGCT ATGGCGCGGA AGGGCTGCGC
CTGTCGCGCC TCGCCTTCGG CGTCGATACC CGCGCGGTGG AGCCGGAGCG GGAGGCCAAA
AGCGTTTCGG CGGAAACCAC CTTCGAGCGC GACATGGGCG CCCTGCGCCC GCTGGAGCAG
ACCCTCTACG CCCTCTCCGA AGAGGTCAGC GACCGCCTCA AGCATGCCGG CATCGCCGGC
CGCGCGGTCA CCTTGAAGCT GAAGAGTGCC GACTTCCGCT TGCGCACCCG CTCGCGCACC
CTGGAGGCCC CCACCTGCCT TGCCGCCCGC ATCAACAACG CGGCGCGGGA GCTGCTGGCG
AAGGAGGTGG ACGGCACGCT GTTCCGCCTC ATCGGCGTGG GGGTCTCGGA CCTCTGCCCC
ATCGCCGACG CCGACCCGGC GGATCTCGTG GACACCTCCA CCGAGCGCCT GAAGGCGGCG
GAAAACGCCA TGGACGAGCT GCGCGCCCGA TTCGGCCGCG GCGCCCTCAC CCGCGGCATC
CTGCTGGACG CCACCACGGA CCGGCGCAGA CGGAAATAG
 
Protein sequence
MTAPGFCRDC LCDAPQTGGL AGDRCPACGS PRLLRHRELD TLSVAHVDCD AFFAAVEKRD 
DPSLADVPLI IGGGKRGVVS TACYIARIKG VRSAMPMFKA LALCPEAVVL KPNMEKYRTV
GRQVRAMMQQ LTPLVEPLSI DEAFLDLSGT QALHGASPAR TLARFAQAVE REVGITVSVG
LAANKFLAKI ASDLDKPRGF SVLGQTEAAG FLAPRPATFI WGVGAAFGGK LAKDGFHTIA
DLQRAAPADL ARRYGAEGLR LSRLAFGVDT RAVEPEREAK SVSAETTFER DMGALRPLEQ
TLYALSEEVS DRLKHAGIAG RAVTLKLKSA DFRLRTRSRT LEAPTCLAAR INNAARELLA
KEVDGTLFRL IGVGVSDLCP IADADPADLV DTSTERLKAA ENAMDELRAR FGRGALTRGI
LLDATTDRRR RK