| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3819 |
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| Symbol | |
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| ID | 5425226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4235091 |
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| End bp | 4236419 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640883075 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001418700 |
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| Protein GI | 154247742 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3524] Capsule polysaccharide export protein |
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| TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.670333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCCC CGGCGCCAGC GTCCAGCGAG ATCCTGAAGG CAGGCTCCCC CGAGGTCGTG
GTGGCCGCCG CCCCGCGGTG GCCCGCGCGG GCGCGTGGCG CGCTTGCCGC GGTGGCCGCG
GTGGCCGCAC GGCTCGCCCG GCTGCTGCCG GCGCGCACCA CCGGCCAGCG CAAGCCCCTG
GCCGTCCGCC TGCCTGCCCT CGCCGACCTG CGCCGCCGCG GCCTTCAGCT GACGCGGCTC
GACCTGGCCA TCCTGTCCTT CGTGGTGGTG GTGGCGGTGC CCTCGGTGCT GTCCTTCCTC
TACCTCGCCA TGGTCGCGGC GCCGCAGTTC CGCTCCGAGA CGCGGTTCGT GGTGCGCGGC
AATCTGGAAA CGGTGGCGGG CGGCGCCAGC CCGGTGTCCG GCTCCAGCAC CGCGCAGGTG
CCCAATTCCC AGGAAGCGCG CGTGGTGGTG GACTATCTGC GCAGCCGCGC CATGGTGGAC
GCCCTGCAGC AGCAGCTTGA CCTGCGCCGG GTGTTCGGCG TCGCCGGCCG CGATCCGGTG
TTCGGCCTTG CGAGCGACGC CAGCGAGGAA GACCTCGTCG CCTACTGGAA CCGGCAGGTG
CGGGTGAGCC TGGAATCCCT GTCCGGGGTG ATCCGGGTGC AGATCCACGC CTTCAGCCCC
GAAAGCGCGG CGCTGCTCGG CGCCGCCATC GTGCGGGAAG CCGAGGCCGT CACCAACGCC
CTCACCACCC GCAACCGCGG CGACCGCGTG CTCCAGGCCG ATGCCGAGGA GCGCGAGGCC
TTCACCGACC TCGCCGTGGT GCGCACCTCC CTCGAAGGCT TCCGCAACGC GCAGGGCACC
CTCGACCCCA CGCGCAGCGC CATCGGCTCC TATGCGGTCA TCGCCAAGCT GCGCGACCAG
CGCTCCGCGC TCAACACCGA CCTCACCGTC GCCCGCGCCC GCATGGACGA GGACTCCCCC
GTGGTGCGCG CGCTGAAGGA GCGCATGCGC TCGCTGGACG AGAAGATCGC GGCGCTGGAC
ACCGACCTGC TCGGCCTCGA CCGGGAGCAG GCCGGCAGCA GCGGCAACCT GAAGGCTGCC
GCCGAGCTGG AAGTGCGCCG CCGCCTCGCC GAGCAGCGGC TGAACGAAGC GGAAAGCGAG
CTGCTGGACG CGCGGACGCA GCAGGCCCAG AAGCAGGTCT ATATCCTGAC CTTCATGGCG
CCGACCCTGC CGGCGGAAAA GGCCTTTCCC TCGCCCCTCG TCGATGCCGC TGCGGTGTCC
GGCATCCTGT TCGCGGCCTG GGCGGTGGCG TCGCTCTATG TGGGCAGCGT CTACGCCCGC
ACCCGCTGA
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| Protein sequence | MVSPAPASSE ILKAGSPEVV VAAAPRWPAR ARGALAAVAA VAARLARLLP ARTTGQRKPL
AVRLPALADL RRRGLQLTRL DLAILSFVVV VAVPSVLSFL YLAMVAAPQF RSETRFVVRG
NLETVAGGAS PVSGSSTAQV PNSQEARVVV DYLRSRAMVD ALQQQLDLRR VFGVAGRDPV
FGLASDASEE DLVAYWNRQV RVSLESLSGV IRVQIHAFSP ESAALLGAAI VREAEAVTNA
LTTRNRGDRV LQADAEEREA FTDLAVVRTS LEGFRNAQGT LDPTRSAIGS YAVIAKLRDQ
RSALNTDLTV ARARMDEDSP VVRALKERMR SLDEKIAALD TDLLGLDREQ AGSSGNLKAA
AELEVRRRLA EQRLNEAESE LLDARTQQAQ KQVYILTFMA PTLPAEKAFP SPLVDAAAVS
GILFAAWAVA SLYVGSVYAR TR
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