| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3773 |
|---|
| Symbol | |
|---|
| ID | 5424156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4180558 |
|---|
| End bp | 4182006 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640883029 |
|---|
| Product | rfaE bifunctional protein |
|---|
| Protein accession | YP_001418655 |
|---|
| Protein GI | 154247697 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.889229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.588929 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGTA AAGGCGCGGC AGGCGCGGTG GGTCCCATCG CCGTCATCGG CGACGTGATG
GTGGATCGCT ATATCGTCGG TTCCGTTTCG CGCATCTCGC CGGAGGCGCC GGTGCCGGTG
CTGGTGCACG GCGCCGAGCG CATCGTGCCG GGCGGCGCCG CCAACGTGGC GGCCAATGCC
GCGGCGCTGG GAGCGCAGGT GATCCTGGTG GGCCTCACCG GCGCCGATCC GGAGGCCGAG
GCGTTGAAGG ACGCGCTTTC CGCCTATCGC GACATTGACC TGTCCAGCCT GGTGGCGGAC
GGGGGGCGGC CCACCATCAC CAAGACGCGG GTGATGAGCG GGCGCCAGCA GATCGTCCGC
ATCGATGCCG AGGTCCTGAC CCCGCCGGCC GACGACACCG TCGCGCGCCT TGTCGCGACC
GTGGAAGAGG CGGTGGGGCG CAGCTCGGTG GTGGTGCTGT CCGACTATGC CAAGGGCGTG
CTGTCGGATG TGGTCATCGG CGCCGCCATC GCTGCGGCGC AGGCGAAGGG CGTGCCGGTG
ATCGTCGATC CCAAGCGCCG CACCTTCGAG GCCTATCGCG GCGCGACGCT GGTCACCCCC
AACCGGCTGG AACTGGCCGC CGCCACCGGC CTGCCCGACA CCACCGACGC CGAGGCGGCC
CTGGCGGCCG AGGCTGCGTC CGGCCAGTTC GGCGGCGACG TGCTGGTGAC CCGCGCCGAG
AAGGGCATGA CGCTGTGGCG CCGCAACGGG CAGGTGCTGC ATGTGCCGGC CCAGGCCCGC
GAGGTGTTCG ACGTGTCGGG TGCCGGCGAT ACGGCGCTGG CGGCACTGGC CGTCTCCCTC
GCCTCCGGGC ACACGCTGGA GACCAGCGTG CATTTCGCCA ATGCCGCCGC CGCGGTCGCG
GTAGGCAAGA TCGGCACGGC AGTGGTGACG CGGGCGGAAC TCAACGCGGC CCTCGACGCC
AGCGTGCCCG AGGGCGCGGC CCCCGGCGCG CTGGTGGACC GTGCCCGGGC CGCCGCCGTC
ATCGCCGGCT GGCAGGCGGC AGGCGCCCGC GTGGTCTTCA CCAATGGCTG CTTTGATCTG
GTCCATCCCG GCCACGTCGC CATCCTGGAG GCGGCGGCGC GGGAGGGCGA CCGGCTGGTG
GTGGCGCTGA ACACCGATGC CTCGGTGCAG CGCCTGAAGG GGCCGACCCG TCCGGTGCAG
GACGAGGCTG CGCGCGCCCG CGTCATCGGT GCGCTGCGCT GCGTCGACCT GGTGGTGCTG
TTCGAGGAGG ACACCCCGCT GGAGATCATC ACCGCGCTCG GTCCGGACGT GCTGGTGAAG
GGCGCCGATT ACCGCGAGGA CCAGGTGGTG GGCGGCGACG TGGTGAAGTC GCGCGGCGGG
CGGGTCGCCC TGATCCCGCT GGTGGAGGGG CGCTCCACGT CAGCGCTGGT GGCGAAGGCG
AAAGGGTAG
|
|---|
| Protein sequence | MAGKGAAGAV GPIAVIGDVM VDRYIVGSVS RISPEAPVPV LVHGAERIVP GGAANVAANA
AALGAQVILV GLTGADPEAE ALKDALSAYR DIDLSSLVAD GGRPTITKTR VMSGRQQIVR
IDAEVLTPPA DDTVARLVAT VEEAVGRSSV VVLSDYAKGV LSDVVIGAAI AAAQAKGVPV
IVDPKRRTFE AYRGATLVTP NRLELAAATG LPDTTDAEAA LAAEAASGQF GGDVLVTRAE
KGMTLWRRNG QVLHVPAQAR EVFDVSGAGD TALAALAVSL ASGHTLETSV HFANAAAAVA
VGKIGTAVVT RAELNAALDA SVPEGAAPGA LVDRARAAAV IAGWQAAGAR VVFTNGCFDL
VHPGHVAILE AAAREGDRLV VALNTDASVQ RLKGPTRPVQ DEAARARVIG ALRCVDLVVL
FEEDTPLEII TALGPDVLVK GADYREDQVV GGDVVKSRGG RVALIPLVEG RSTSALVAKA
KG
|
|---|
| |