Gene Xaut_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3479 
Symbol 
ID5423896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3872291 
End bp3875131 
Gene Length2841 bp 
Protein Length946 aa 
Translation table11 
GC content66% 
IMG OID640882734 
Productformate dehydrogenase, alpha subunit 
Protein accessionYP_001418365 
Protein GI154247407 
COG category[R] General function prediction only 
COG ID[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID[TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.389807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCG TTCACGAAAT CGACTACGGC ACGCCGGCTT CCAAGTCCGA GAAGCTTGTT 
TCCCTCACCA TCGACGGCAT GAGCGTCACG GTGCCCGAGG GCACCTCCAT CATGCGCGCC
GCCATGGAGC TGGGGAACCA GATCCCCAAG CTCTGCGCCA CCGACATGCT TGAGAGCTTC
GGTTCGTGCC GGCTCTGCCT GATCGAAATC GAAGGCCGCA ACGGCACCCC GGCGTCCTGC
ACCACTCCGG TGGCCGAAGG CATCGTGGTC AAGACCCAGA CCGAGCGCCT GAAGCAGATC
CGCAAGGGGG TGATGGAGCT CTATATCTCC GACCACCCGC TGGACTGCCT CACCTGCTCC
GCCAACGGCG ACTGCGAACT GCAGGACATG GCCGGTGTGG TGGGCCTGCG CGATGTGCGC
TACGGCTATG AGGGCGAGAA CCACACCAAG CTCGGCAAGG ACGAGTCCAA CCCGTACTTC
ACCTACGAGC AGTCGAAGTG CATCGTCTGC AATCGGTGCG TTCGCGCCTG CGAGGAAGTG
CAGGGCACGT TTGCGCTCAC CATCTCCGGC CGCGGCTTCG GCTCGCGGGT GTCGCCGGGC
ATGGACGAGC CCTTCCTCAC CTCGGAATGC GTCTCCTGCG GCGCCTGCGT TCAGGCCTGC
CCCACGGCGA CGCTGAACGA GAAGGCCATG TACGACATCG GCACCCCCGA GCATTCGGTG
GTGACCACCT GCGCCTATTG CGGCGTCGGC TGCACCTTCA AGGCCGAGAT GCGCGGCGAC
GAGCTGGTGC GCATGGTGCC CTACAAGGAC GGCAAGGCGA ACCGTGGCCA TTCCTGCGTC
AAGGGCCGCT TCGCCTATGG CTACGCCACC CACCAGGACC GCATCCTGAA GCCCATGATC
CGCTCCTCCA TCCACGAGCC GTGGAAGGAA GTGACCTATG AGGAGGCCAT CGCCTACGCC
GCCTCCGAGT TCAAGCGGAT CCAGGAGAAG TACGGCAAGC GTGCGGTGGG CGGCATCACC
TCCTCGCGCT GCACCAACGA GGAGACCTAC CTCGTCCAGA AGCTGATCCG CGGCGGCTTC
GGCAACAACA ACGTGGACAC CTGCGCCCGC GTCTGCCACT CGCCCACCGG CTACGGCCTT
TCCCAGACCT ACGGCACCTC CGCCGGCACC CAGGACTTCG ACAGCGTCGA GGAGACGGAT
GTCGTCCTGA TCATCGGCGC CAACCCCACC GACGGCCATC CAGTGTTCGG CTCGCGCCTG
AAGAAGCGGC TGCGCGAAGG CGCGAAGCTG ATCGTGGTGG ACCCGCGCCG CACCGACATC
GTGCGCTCGC CCCATATCGA GGCGGCCTAT CACCTGCCGC TCAAGCCCGG CACCAATGTC
GCCATCGTCA CGGCGCTGGC CCATGTGGTC GTCACCGAAG GGCTGGTGAA CGAGCAGTTC
GTGCGCGAAC GCTGCGACTG GGACGAGTTC CAGGACTGGG CCGCCTTCGT CGCCGACGAG
CGCCACTCGC CGGAAGCGGT GGAGAAGTAC ACCGGCGTCG ATCCGGCCCT GGTGCGCGGC
GCGGCCCGGC TCTATGCCAC CGGCGGCAAC GGATCGATCT ATTACGGCCT CGGCGTCACC
GAGCATTCGC AGGGCTCCAC CACGGTGATG GCCATCGCCA ACCTCGCCAT GGCCACCGGC
AACGTGGGCC GCAACGGCGT GGGCGTGAAC CCGCTGCGCG GCCAGAACAA CGTGCAGGGC
TCGTGCGACA TGGGCTCGTT CCCGCACGAG CTGCCGGGCT ACCGCCACGT CTCCGACGAT
GCTACCCGCT CGACCTTCGA GGCGCTGTGG GGCGTGCCGC TGGACGACGA GCCGGGCCTG
CGCATTCCCA ACATGTTCGA CGCGGCGGTG GATGGCACGT TCAAGGGCCT CTACGTGCAG
GGCGAGGACA TCCTCCAGTC CGACCCCGAC ACCAAGCACG TCTCGGCGGG CCTTGCGGGT
CTTGAATGCC TGATCGTGCA GGACCTGTTC CTGAACGAGA CGGCGAACTA CGCCCACGTC
TTCCTCCCCG GCTGCTCGTT CCTGGAGAAG GACGGCACCT TCACCAATGC CGAGCGCCGC
ATCCAGCGCA TCCGCAAGGT GATGGCACCG AAGAACGGCT ATGCCGACTG GGAGGTCACC
CAGCTCCTCG CCAACGCGCT GGGCTTCCCC ATGAATTACA CCCACCCGTC TCAGATCATG
GACGAGATCG CGGCGCTCAC CCCCACCTTC GCGGGCGTGA ACTATGCCAA GCTCGACGAG
CTGGGATCGG TGCAGTGGCC GTGCAACGAC AGCGCGCCGG AAGGCACGCC CATCATGCAC
ATTGGCGGCT TCGTGCGCGG CAAGGGCAAG TTCGTCCTCA CCGAATACGT GCCCACCGAC
GAGAAGACCG GGCCGCGCTT CCCGCTGCTG CTCACCACCG GCCGCATCCT CAGCCAGTAC
AATGTGGGTG CCCAGACGCG GCGCACCGCG AACGTGGCCT GGCATCCGGA GGACGTGCTG
GAAATCCATG CCCACGACGC CGAGAACCGC GGCATCCGCG ACGGCGATTT CGTGAAGCTG
GACAGCCGGG CGGGCTCCAC CTCGCTGCGC GCGGTGATCT CGGATCGGGT GGCGCCGGGG
GTGGTCTACA CCACCTTCCA CCATCCGGTG ACGCAGGCCA ACGTGGTCAC CACCGACTAT
TCCGACTGGG CCACCAACTG CCCGGAATAC AAGGTGACCG CCGTGCAGGT TTCGCCCTCC
AACGGCCCCA CCCAGTGGCA GGAGGACTAC GAGAACCTCT CGCGCACTTC CCGCCGCATC
GCCGCAGAAG CTGCGGAGTG A
 
Protein sequence
MSLVHEIDYG TPASKSEKLV SLTIDGMSVT VPEGTSIMRA AMELGNQIPK LCATDMLESF 
GSCRLCLIEI EGRNGTPASC TTPVAEGIVV KTQTERLKQI RKGVMELYIS DHPLDCLTCS
ANGDCELQDM AGVVGLRDVR YGYEGENHTK LGKDESNPYF TYEQSKCIVC NRCVRACEEV
QGTFALTISG RGFGSRVSPG MDEPFLTSEC VSCGACVQAC PTATLNEKAM YDIGTPEHSV
VTTCAYCGVG CTFKAEMRGD ELVRMVPYKD GKANRGHSCV KGRFAYGYAT HQDRILKPMI
RSSIHEPWKE VTYEEAIAYA ASEFKRIQEK YGKRAVGGIT SSRCTNEETY LVQKLIRGGF
GNNNVDTCAR VCHSPTGYGL SQTYGTSAGT QDFDSVEETD VVLIIGANPT DGHPVFGSRL
KKRLREGAKL IVVDPRRTDI VRSPHIEAAY HLPLKPGTNV AIVTALAHVV VTEGLVNEQF
VRERCDWDEF QDWAAFVADE RHSPEAVEKY TGVDPALVRG AARLYATGGN GSIYYGLGVT
EHSQGSTTVM AIANLAMATG NVGRNGVGVN PLRGQNNVQG SCDMGSFPHE LPGYRHVSDD
ATRSTFEALW GVPLDDEPGL RIPNMFDAAV DGTFKGLYVQ GEDILQSDPD TKHVSAGLAG
LECLIVQDLF LNETANYAHV FLPGCSFLEK DGTFTNAERR IQRIRKVMAP KNGYADWEVT
QLLANALGFP MNYTHPSQIM DEIAALTPTF AGVNYAKLDE LGSVQWPCND SAPEGTPIMH
IGGFVRGKGK FVLTEYVPTD EKTGPRFPLL LTTGRILSQY NVGAQTRRTA NVAWHPEDVL
EIHAHDAENR GIRDGDFVKL DSRAGSTSLR AVISDRVAPG VVYTTFHHPV TQANVVTTDY
SDWATNCPEY KVTAVQVSPS NGPTQWQEDY ENLSRTSRRI AAEAAE