Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3362 |
Symbol | rplJ |
ID | 5423191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 3742637 |
End bp | 3743155 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640882615 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_001418248 |
Protein GI | 154247290 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.256068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.223881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATCGAG CGCAAAAACA AGAGCTCGTC ACGACGCTCA CGGATGTGTT CAAGAGCACG TCCGTCGTCG TGGTCGCCCA CTATTCCGGC CTCACCGTTG CCCAGCTGTC GCGCCTGCGC CGGCAGATGA AGGCAAGCGG TGCGACCGTG AAGGTGGCAA AGAACCGCCT CGCCAAGATC GCTCTGGAAG GCTCCGACGT CGCCCATGTG TCGTCCCTGC TCAAGGGACC GACCCTGATC GCCTATTCCA GCGATCCGGT GGCGGCGCCG AAGGTGGCTG TCGACTTCGC CAAGACGAAT GACAAGTTCG TGATCCTCGG CGGAGCGATG GGCACTACGG CCCTGAACGT GGACGGAGTG AAGGCGCTTG CGACCCTTCC GTCCCTGGAC GAACTGCGTG CCAAGCTCGT CGGCCTTATC CAGGCCCCGG CGACCAAGAT CGCGCAGGTC ACCACCGCGC CGGCAGCCAA GCTCGCCCGC GTGTTCGGGG CCTATGCCAA ACAGGACGAA GCTGCGTGA
|
Protein sequence | MDRAQKQELV TTLTDVFKST SVVVVAHYSG LTVAQLSRLR RQMKASGATV KVAKNRLAKI ALEGSDVAHV SSLLKGPTLI AYSSDPVAAP KVAVDFAKTN DKFVILGGAM GTTALNVDGV KALATLPSLD ELRAKLVGLI QAPATKIAQV TTAPAAKLAR VFGAYAKQDE AA
|
| |