| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3300 |
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| Symbol | |
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| ID | 5423200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3668182 |
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| End bp | 3671685 |
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| Gene Length | 3504 bp |
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| Protein Length | 1167 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640882547 |
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| Product | double-strand break repair helicase AddA |
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| Protein accession | YP_001418186 |
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| Protein GI | 154247228 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.107239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG ACCTTACCCC CGAAGCCACC CCCGATGCCG CCCGCGATCC CAAGTCAGAG
GCGACGCGCC GCCAGTCGGA GGCCTCCCAT CCCGCCTTCT CGGCCTGGGT GTCCGCCAAT
GCCGGCTCGG GCAAGACCCA TGTGCTGGCG CGCCGCGTCA TCCGCCTGCT GCTCGCCGGC
ACGCCGCCGG GGCGTATCCT GTGCCTCACC TATACCAAGG CGGCGGCGGC CAACATGGCC
AACCGCGTGC TGGCCATCCT TGGCCGCTGG GTGCGCCTGC CCGATGCGGA GCTGGACGAC
GCCATCCGCG ACACGGTGGG CTCGCCCCCC GACGCCGCCC TGCGCGCCCG CGCCCGCCGG
CTGTTCGCCG CCGCGTTGGA GACGCCGGGC GGGCTGAAGA TCCAGACCAT CCACGCCTTC
TGCGGCGCCC TGCTGCATCG CTTTCCGTTC GAGGCGGACG TGGCCGCCGG CTTCGGCGAG
CTGGACGAGG TGGGCCGGCA GGAATTGATG GCCCGCATCC GCGCCGACCT CGTGGTGGCG
GCCAGCCGCA CGCCCAACGC GCTCCTTGGC GAGGCGTTGG CGCGGCTGAC CGAAGATATG
TCCGACAGCG GCCTCTCGGG CCTGCTGGAG GCCGCCGTCG CCCTGCGCGC CCGCATCCTG
CCGCTGGGCG ACACGCCGCG CGCGCGGCGG GCGGCGGTGG CGCGGGCGCT GGATCTGCCA
GCAGATGCGA GCGTGGCGGA TCTGGAAGTG CAGATGCTGG CTAGCCCCCA TCTGCCTCAT
TCCGAATGGG CGAGCGCGGC GGCGGAACTG GCCGCTTCCG ACAAGGCCAC CGACCGCACC
CGAGGCGACG ATCTTCTGGC CGCCGCCGAG GCGGGGGACA CGGCGTCCGG CCTTGCCGCC
TGGCGGCGGG TGTTCTTCGG CTCGGAGGGA CCGCGCTCGG ACCGCAACCT CTTCACCAAG
GGCTTCGCTG ACCGTGCCCC CGGCCTTGCC GCGCGGCTGC GGGACGAGCG GGACCGCCTC
GCGGTGCTTG CCGACCAGCT GCTGGGTGCC CGCACCCTGG AGCGGACCGA GGCAGCGCTG
ACCCTCGCGG CCGAAGCCGT CCGCCGCTAC GAGGCGGAGA AGGCGGCGCG CGGGCTGCTG
GATTTCGACG ACCTCATCGT CAAGGCCGCC CAGCTTCTGT CGGACCAGCC CACCTTCGTG
CAATACAAGC TGGACCAGGG CATCGACCAC ATCCTGGTGG ACGAGGCCCA GGATACGAGC
CCGCAGCAGT GGCGGGTGGT GCAGGGCCTC GCCGACGATT TCTTCTCCGG CGCCGGCGCG
CGGGAGGACG TGACCCGCAC CCTGTTCGTG GTGGGCGACG AGAAGCAGTC CATCTTCTCC
TTCCAGGGCG CCGATCCGCG CGCCTTCGGC GAGATGCGCT CGACCTTCGC ACGCAAGGCG
GGGCCACAGG CCCTGCGGCG GGTGGAGCTG CCCCATTCCT TCCGCTCCGC CCCCGGCGTG
CTGGAGGCGG TGGACCAGAT CTTCTCCCGC CCCGAGGCCC ATGATGGCCT CACGCTGGAC
GCCGTGGCCC CCGTGCACGC CGCCATCCGC GCCGATGCTC CGGCCCTGGT GGAGATCTGG
CCCACCACCA CGCCCGAGCC CGCAACCCAG CCCGACAATT GGCGCCGCCC GCTGGACGAG
GCGCCGGTGG ACGACCCGGT GAGCCGGCTC GCCCAGCGCA TCGCCGGCTT CATCCAGGCG
GGCATCGCCA AGGGCCTCGC CATCCCCTCC CGGCAGGGGC GGCCCATGCG GGCGGGCGAC
GTGCTGGTGC TGGTGCGCCG GCGCGGGCGG GTGTTCGAGG CCGTCATCCG CGCCTTGAAG
GAATTGAAGG ACGCTCAGGT GGAAGTGGCG GGCGCCGACC GCCTGGTGGT GGCCGAGCAT
ATCGCCGCCC TCGACCTGAT GGCGCTGGGC GATACGCTGG TCTCCCCCGA CGACGACCTG
GCGCTGGCGG CCCTGCTGAA GAGCCCTCTG TTCGGCCTCA CCGACGACGA TCTCCTGGCC
CTGTGCACCG GCCGGAGCGG GCGGCTGGTG GACGCGCTCA AGGCGGCGCC GGATCCGCGC
CATGCTGCAG CCTGGGCGCG GCTCGCCGCA TGGCGCGGGG AGGCGGCCTT GCTGCGGCCG
TTCGATTTCT ACGCCCGCGT GCTGGGGCGC GACGGCGGCC GGCGCGCCAT GCTGGCCCGG
CTCGGTCCCG AGGCTGCGGA CGTGCTGGAC GAATTCATGG TGCTGGCCCG CGCCTACGAA
TCCACAGAGC CGGCGAGCCT TGCCGGCTTC CTCGCCTATC TGCGCCGGGG CGGTGCCGAG
ACCAAGCGCG ACATGGAGAG CGGCCGCAAC GAGGTGCGGG TGATGACCGT GCACGGCGCC
AAGGGCCTTG AAGCGCCTAT CGTCATCCTC GCCGACACGG TGGACATGCC GAAGGCCCGC
ACCGCCGGCG GTCTTGTGAG CGTGGCGGGG CCGGAGGGGG AGGTGCCGGT GCTGGCCCCG
CGCAAGGCGG AGGACCCGGA GCGCCTCGCC GCCGCCCGCG CCACGGCCGC CGCCCGCGAG
CTGGAGGAGC ACCGGCGCCT GCTCTATGTG GCCCTCACCC GGGCCGAGGA TGCGGTGATC
GTCTGCGGCG CGGAGACCCG ATCGCCGGCC AAGGACAAGG CCCATGCTCG TCCAGAGGGC
TGCTGGTACG AGCTGGTGCG CGCCGCCCTC GCGCCGGAGG CGGACGAGCA GAATGCCCTC
GGCTTTGAGG GCCAGGTGCT GCGCTGGAAC AAGGGGCCGG GCCTCGCCGT GGCCGGGCCG
GCGGCGGCCC CTTCCGCGGC TGGGGCAGAG CCGGCGCTGC CGATTTTCGC CAATCCACCG
CCCCCGGAAG CCGCGCCGCG CCTGCTGCGG CCTTCCAAGA CCGAGGCGGC CGGTCCCTCG
CCCTTGCGCA CGCCGGGACC GGAGACGGCG CTGTCGCCCC TGGTACGGGG CGATCTGGTC
CATCGCCTGC TCGCCGGCCT GCCCGACCTG CCGGCACAAG AGCGCGCGGC GGCGGGCCTG
CGCCTTCTGC GGCACGCGGC GGACAAGGTG GCGGACGAGA TTCATCAGGA GGTGCTGGAG
GAAGCGCTGG GCGTCCTCGG CCATGCGCCG CTCGCGGACC TGTTCGGCGC CGGAAGCCGG
GCGGAAGTTC CGGTCATCGG CCGGCTGAAG GCGCAGGAGG GCGCGGATTT CCACGTTTCC
GGACGAATTG ACCGGCTGGC GGTGACGCCC GACCTGCTGA TCGTCGCCGA CTTCAAGACC
GACCGCATCC CACCCCAGCG GCCGGAAGAC GTGGCCGAGG CTTATGTGGC GCAGCTTGCC
GTCTATGGCG CTCTTCTGTC GCAGGTGTTC GCCGGGCGGG CCTTCGAGGC GCGGCTGGTC
TATACGACGG GTCCTCGCGT TTTCCGGCTC GAATCCGCCC GTTTGCAGGC GGCGCTGGCC
CGGCTCGGTC TCACCTCGCC GTGA
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| Protein sequence | MSADLTPEAT PDAARDPKSE ATRRQSEASH PAFSAWVSAN AGSGKTHVLA RRVIRLLLAG
TPPGRILCLT YTKAAAANMA NRVLAILGRW VRLPDAELDD AIRDTVGSPP DAALRARARR
LFAAALETPG GLKIQTIHAF CGALLHRFPF EADVAAGFGE LDEVGRQELM ARIRADLVVA
ASRTPNALLG EALARLTEDM SDSGLSGLLE AAVALRARIL PLGDTPRARR AAVARALDLP
ADASVADLEV QMLASPHLPH SEWASAAAEL AASDKATDRT RGDDLLAAAE AGDTASGLAA
WRRVFFGSEG PRSDRNLFTK GFADRAPGLA ARLRDERDRL AVLADQLLGA RTLERTEAAL
TLAAEAVRRY EAEKAARGLL DFDDLIVKAA QLLSDQPTFV QYKLDQGIDH ILVDEAQDTS
PQQWRVVQGL ADDFFSGAGA REDVTRTLFV VGDEKQSIFS FQGADPRAFG EMRSTFARKA
GPQALRRVEL PHSFRSAPGV LEAVDQIFSR PEAHDGLTLD AVAPVHAAIR ADAPALVEIW
PTTTPEPATQ PDNWRRPLDE APVDDPVSRL AQRIAGFIQA GIAKGLAIPS RQGRPMRAGD
VLVLVRRRGR VFEAVIRALK ELKDAQVEVA GADRLVVAEH IAALDLMALG DTLVSPDDDL
ALAALLKSPL FGLTDDDLLA LCTGRSGRLV DALKAAPDPR HAAAWARLAA WRGEAALLRP
FDFYARVLGR DGGRRAMLAR LGPEAADVLD EFMVLARAYE STEPASLAGF LAYLRRGGAE
TKRDMESGRN EVRVMTVHGA KGLEAPIVIL ADTVDMPKAR TAGGLVSVAG PEGEVPVLAP
RKAEDPERLA AARATAAARE LEEHRRLLYV ALTRAEDAVI VCGAETRSPA KDKAHARPEG
CWYELVRAAL APEADEQNAL GFEGQVLRWN KGPGLAVAGP AAAPSAAGAE PALPIFANPP
PPEAAPRLLR PSKTEAAGPS PLRTPGPETA LSPLVRGDLV HRLLAGLPDL PAQERAAAGL
RLLRHAADKV ADEIHQEVLE EALGVLGHAP LADLFGAGSR AEVPVIGRLK AQEGADFHVS
GRIDRLAVTP DLLIVADFKT DRIPPQRPED VAEAYVAQLA VYGALLSQVF AGRAFEARLV
YTTGPRVFRL ESARLQAALA RLGLTSP
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