Gene Xaut_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3235 
Symbol 
ID5422249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3586979 
End bp3587665 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content67% 
IMG OID640882481 
Producttwo component transcriptional regulator 
Protein accessionYP_001418121 
Protein GI154247163 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.40462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCG TGAAGCTCCT CGTGGTGGAT GACGAGCCGG CCATCCGCAA GCTGCTCAAT 
GCCGGACTGT CCACCCAGGG CTATGACGTG ACCAGCGCCG CCACCGCCGC CGAGGCCATT
GCCCGCGTCA CCGAGGCCCG GCCCGACCTC ATCATCCTCG ACCTCGGACT GCCCGACATG
CCGGGCCGCG ACCTGCTCGC CCGCTGGCGT GCCGAAGGGC TGGATGCCCC CGTGGTGATC
CTCTCCAGCC GCACCGACGA GGCCGGCATC GTCGAGGCGC TGGAGGGAGG GGCGGACGAT
TATGTCACCA AGCCGTTCGG CATGAATGAG CTGATCGCCC GCCTGCGCGT CGCGCTGCGC
CACCGGTTGC AGCAGCAGGG GGAAAAGCCC CTGTTCAAGG TGGGCGACCT GTCGGTGGAC
CTGGTGCGCC GCATCGTCCG GCTGAAGGAG CGGGAGGTGA AGCTCTCGCC CAAGGAATAC
GACATCCTGC GCCTCATGGT GCAGCATGCC GGCCGGGTGC TCACCCACGC CTTCATCCTG
CAAAAGGTGT GGGGCAGCGC TTATGACGTG CAATATCTGC GGGTCTATGT GCGCCAGCTG
CGGCAGAAGC TGGAGGACAA CCCTGAGCAA CCGCGCTACA TCCGCACCGA GACCGGCGTC
GGCTACCGCC TCGCCGAGCC GGACTGA
 
Protein sequence
MNGVKLLVVD DEPAIRKLLN AGLSTQGYDV TSAATAAEAI ARVTEARPDL IILDLGLPDM 
PGRDLLARWR AEGLDAPVVI LSSRTDEAGI VEALEGGADD YVTKPFGMNE LIARLRVALR
HRLQQQGEKP LFKVGDLSVD LVRRIVRLKE REVKLSPKEY DILRLMVQHA GRVLTHAFIL
QKVWGSAYDV QYLRVYVRQL RQKLEDNPEQ PRYIRTETGV GYRLAEPD