Gene Xaut_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3203 
Symbol 
ID5421267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3551326 
End bp3551850 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID640882448 
ProductSNARE associated Golgi protein 
Protein accessionYP_001418089 
Protein GI154247131 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.473398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.981732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG TTCAGGCCAT TATTGCTGCG ACCACCGCGT TTGTTCAGAA CAACCACGCT 
CTCGCTGCTC CGATCGTGTT CGGCCTCGCC TTTGGCGAAT CGCTCGCCCT CGTATCCTTC
TTCATTCCGG CGACCGTGCT TCTGCTCGCC ATCGGCGCGC TGATCGAGGC GAGCGGGCTG
CACTTCTTCC CCATCTGGCT GGCCGCCGCC ACCGGCGCGG CGCTGGGGGA CGCCATCTCC
TACTGGTTCG GTTTCCACTA CAAGGAGCGG GCGAAGACCT TCTGGCCGCT GTCGAAACGG
CCCGACCTGG TGGCTCGCGC GGAGGACTTC TTCCATCGCT TCGGCGTCTG GGGCGTGGCC
ATCGGCCGCT TCTTCGGGCC CGTGCGCGCG GTGGTGCCGC TGGTGGCCGG CGTACTCGCC
ATGCGCCAGA CCCATTTCCA GATGGCCAAC GTCGCCAGCG CGGCGGTCTG GGCCTTCGCC
ATGCTTGCCC CTGGTGCGGC CGCCTTCAAG CTGTTCGGCT TCTGA
 
Protein sequence
MIDVQAIIAA TTAFVQNNHA LAAPIVFGLA FGESLALVSF FIPATVLLLA IGALIEASGL 
HFFPIWLAAA TGAALGDAIS YWFGFHYKER AKTFWPLSKR PDLVARAEDF FHRFGVWGVA
IGRFFGPVRA VVPLVAGVLA MRQTHFQMAN VASAAVWAFA MLAPGAAAFK LFGF