| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3118 |
|---|
| Symbol | rpsF |
|---|
| ID | 5424945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3459252 |
|---|
| End bp | 3459710 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640882364 |
|---|
| Product | 30S ribosomal protein S6 |
|---|
| Protein accession | YP_001418005 |
|---|
| Protein GI | 154247047 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0360] Ribosomal protein S6 |
|---|
| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.158791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTTT ACGAGCACGT GTTCCTCGCG CGCCAGGACG TGACGGCGCA GCAGGTCGAG
GAACTCACCA CCCGATTCAA GGGTGTCATC GAGGCGAATG GCGGCTCGGT CGGCAAGACC
GAGTACTGGG GCGTGAAGTC CCTGACCTAT CGCATCAACA AGAACCGCAA GGCGCACTTC
ACGCTCCTGA ACATCAATGC CCCCGCGGCG GCGATCCAGG AGCTGGAGCG CCAGCAGCGC
ATCGACGAAG ACGTCCTGCG CATCCTCACC CTCCGCGTCG AGGAGCATGA GGAAGGCCCG
TCCGCCATGC TCCAGAAGCG CGACCGCGAT GATCGCGGCG AGCGTGGGGA CCGTGGCGAT
CGCGGTGATC GTGGTGACCG GGGCTTCGGT GGTCGCGAGG ACCGCCCGCG CCGTCCGCGT
CCCACTGAAG AGTCCCATGG CGGCGAGGAG GAAGTCTGA
|
|---|
| Protein sequence | MPLYEHVFLA RQDVTAQQVE ELTTRFKGVI EANGGSVGKT EYWGVKSLTY RINKNRKAHF
TLLNINAPAA AIQELERQQR IDEDVLRILT LRVEEHEEGP SAMLQKRDRD DRGERGDRGD
RGDRGDRGFG GREDRPRRPR PTEESHGGEE EV
|
|---|
| |