| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2876 |
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| Symbol | |
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| ID | 5422124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3201320 |
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| End bp | 3203308 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640882130 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_001417772 |
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| Protein GI | 154246814 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.333866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCCA CGAAGATTCT CTGGGGACAG ATTCTCGCCG TCTTCGTGAT CGTGCTGACC
ACGACCTGGA CCGCGACCCA GTGGACGGCA TGGCAGCTAG GCTTCCAGCC GCAACTCGGC
CGGCCATGGT TCGAGGCATT TGGCTGGCCA GTCTACCATC CGCCGGCCTT CTTCTGGTGG
TGGTACTTCT ACGACGCCTA TGCGCCTTCG GTTTTCGTCG AGGGCGCCTA CATCGCCGCA
TCCGGCGGCT TCATTGCCAT CGCGGTCGCC ATCGGCATGT CAGTGTGGCG AGCCCGCGAG
GCCAAAAATG TCGAAACCTA TGGTTCGGCG CGCTGGGCGC GAGCCGACGA GGTGCGCGCC
GCCGGCCTGC TTGGGCCCGA TGGCGTGGTG CTCGGCAGGT TCGATCGCGC CTATCTTCGC
CATGACGGGC CAGAGCATGT GCTGTGCTTC GCGCCGACCC GCTCCGGCAA GGGCGTCGGC
CTGGTCGTGC CCTCGCTGCT GACCTGGCCG GGCTCCGCCA TCGTTCACGA CATCAAGGGC
GAGAACTGGC AGCTCACTTC CGGCTTCCGC GCCCAACATG GCCGCGTGCT GCTGTTCGAT
CCCACGAATG CGAAGTCGTC CGCTTACAAC CCGCTGCTCG AAGTCCGCCG CGGCGAATGG
GAGGTCCGCG ACGTCCAGAA CATCGCCGAC ATCCTGGTCG ATCCCGAAGG GAGTTTGGAA
CGCCGCAATC ATTGGGAGAA GACGTCCCAC GCACTCCTCG TCGGCGCTAT CCTGCACGTT
CTCTACGCTG AGACCGACAA GACACTCGCA GGCGTCGCCG CCTTCCTCTC CGACCCCAAG
CGGCCGATCG AGTCGACGCT CGCCGCCATG ATGAAGACGG CGCATCTCGG CGAAGCTGGA
CCGCACCCGG TCATCGCATC GGCCGCGCGC GAGCTGCTGA ATAAGTCCGA CAATGAGCGG
TCGGGCGTCT TGTCGACCGC GATGTCGTTT CTCGGACTCT ATCGCGATCC CGTGGTGGCG
GATGTTACGC GCCGTTGCGA CTGGCGCATC ACAGACATTG TTGGCGGAGC GCGACCGTCG
ACGCTCTACC TCGTCGTGCC GCCATCTGAC ATCGCGCGCA CCAAGCCGCT GATCCGGCTT
ATCCTCAATC AGATCGGACG CCGACTGACG GAGGATCTCA ACGCCAAAGG CAGGCGGCAC
CGGCTGCTGC TCATGCTCGA CGAGTTTCCC GCACTCGGGC GCCTCGACTT CTTCGAGAGC
GCCTTGGCGT TCATGGCGGG CTATGGGCTG AAGAGCTTCC TGATCGCCCA GTCGCTCAAT
CAGATTGAGA AAGCGTATGG TCCGAACAAC TCGATCCTCG ACAACTGCCA TGTGCGCGTG
AGCTTCGCGA CCAATGACGA GCGCACGGCC AAACGCGTCT CCGACGCCCT CGGCACCGCG
ACCGAGATGC GGGCAATGCG AAACTACGCG GGGCACAGGC TGAGCCCATG GCTCGGCCAT
CTGATGGTTT CGCGATCGGA GACGGCGCGC CCACTGCTGA CGCCGGGTGA GGTGATGCAG
CTCCCGCCCG CCGACGAGAT CGTGATGGTG GCCGGTACGC CGCCGATACG CGCGAAGAAA
GCCCGCTATT TCGAGGATCG CCGGTTTCAG GAACGCGTCC TGCCACCACC CGCGCTCGCG
AGGCCAGCCG CGGGAAAGCC GGACGATTGG AGCGCCCTGC CATTGCCGTC GCGGCCGCAA
CCCGATGCAG CCGCGCAGCA GGACGGCACC GGCGATGACG ACTCGACCGG CTCCGAACGG
CGTCAGCAAC CGGAGCTGAC CGCGGTAAAG CCTGTCGAGA GGAAGGCGCC GATCGACAAC
GAGTTCGAGC TCGATGGTCC CGACGACGCC GATGACGACG ACGCCGCGCG CGCAGGCCGG
CTGAATCAGG TGATGCAGGG CGTCGCGCGG CAGGTCTCGC TCGATCCCAG TGACGGGATG
GACCTCTGA
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| Protein sequence | MSATKILWGQ ILAVFVIVLT TTWTATQWTA WQLGFQPQLG RPWFEAFGWP VYHPPAFFWW
WYFYDAYAPS VFVEGAYIAA SGGFIAIAVA IGMSVWRARE AKNVETYGSA RWARADEVRA
AGLLGPDGVV LGRFDRAYLR HDGPEHVLCF APTRSGKGVG LVVPSLLTWP GSAIVHDIKG
ENWQLTSGFR AQHGRVLLFD PTNAKSSAYN PLLEVRRGEW EVRDVQNIAD ILVDPEGSLE
RRNHWEKTSH ALLVGAILHV LYAETDKTLA GVAAFLSDPK RPIESTLAAM MKTAHLGEAG
PHPVIASAAR ELLNKSDNER SGVLSTAMSF LGLYRDPVVA DVTRRCDWRI TDIVGGARPS
TLYLVVPPSD IARTKPLIRL ILNQIGRRLT EDLNAKGRRH RLLLMLDEFP ALGRLDFFES
ALAFMAGYGL KSFLIAQSLN QIEKAYGPNN SILDNCHVRV SFATNDERTA KRVSDALGTA
TEMRAMRNYA GHRLSPWLGH LMVSRSETAR PLLTPGEVMQ LPPADEIVMV AGTPPIRAKK
ARYFEDRRFQ ERVLPPPALA RPAAGKPDDW SALPLPSRPQ PDAAAQQDGT GDDDSTGSER
RQQPELTAVK PVERKAPIDN EFELDGPDDA DDDDAARAGR LNQVMQGVAR QVSLDPSDGM
DL
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