Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_2873 |
Symbol | |
ID | 5421722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 3196931 |
End bp | 3197707 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640882127 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001417769 |
Protein GI | 154246811 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0739843 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGACGC GCCGCCCATC GCGCAGGCAA CCGGTGGAGA CCGGGCGGAC ACGCGCCGCC CGGCATCTCT CCGTCCTTCT CCTTTCCGGC CTGCTGATCG TCAGCGGATC ACCGGCCACC GCGCTGGCGC AGAACGCGAC GACCTCGCGC GCAAGCCCAG CCGATCCGTT CGCCGTCTTC ATCGCCGAGG CTTCGCAACG CTTCGGCATT CCGGAGCGCT GGATTCGCGC CGTCATGCGT GCCGAAAGCG CGGGCGACGT GCGCGCGATC TCATCCGCGG GCGCAATGGG TCTGATGCAG ATCATGCCCC ATACATGGAC GGAGCTTCGC ACACGCCACC GACTGGGGCG CGATCCTTAC AGTCCGCGCG ACAACATCCT CGCGGGCGCG GCCTACCTGC GCGAGATGTA TGATCGCTAT GGTTCGCCAG GCTTCCTGGC CGCCTACAAT GCGGGGCCGG GACGCTACGA GGAGTATCTC GCCGGTCGCC CGCTCCCGGC CGAGACCCGC GCCTACGTCG CCGCGCTGGT CCCTTTATTC GGCGGCGGTG ATCTCCCCAG TCCAGTCGCC GTCGCCGTCG CCGATCCGCC ACAGGCTTGG ACCCGCGCCC CGCTGTTCGT CGCGCGTATC GAGCGCATCT CGGCTGCCGA TCCAGCGCAA ACCCCGCACC ATCCGGACGA CGCTCCTGCG ACACCTCCCG TGCGCGAGGT TTCCGCGATC ATGCCGCAGT CCTCCGGCCT GTTCGTCGCG CGGCCTGATG GTCGAGGGCC GCAATGA
|
Protein sequence | MPTRRPSRRQ PVETGRTRAA RHLSVLLLSG LLIVSGSPAT ALAQNATTSR ASPADPFAVF IAEASQRFGI PERWIRAVMR AESAGDVRAI SSAGAMGLMQ IMPHTWTELR TRHRLGRDPY SPRDNILAGA AYLREMYDRY GSPGFLAAYN AGPGRYEEYL AGRPLPAETR AYVAALVPLF GGGDLPSPVA VAVADPPQAW TRAPLFVARI ERISAADPAQ TPHHPDDAPA TPPVREVSAI MPQSSGLFVA RPDGRGPQ
|
| |