Gene Xaut_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2873 
Symbol 
ID5421722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3196931 
End bp3197707 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content69% 
IMG OID640882127 
Productlytic transglycosylase catalytic 
Protein accessionYP_001417769 
Protein GI154246811 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0739843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGC GCCGCCCATC GCGCAGGCAA CCGGTGGAGA CCGGGCGGAC ACGCGCCGCC 
CGGCATCTCT CCGTCCTTCT CCTTTCCGGC CTGCTGATCG TCAGCGGATC ACCGGCCACC
GCGCTGGCGC AGAACGCGAC GACCTCGCGC GCAAGCCCAG CCGATCCGTT CGCCGTCTTC
ATCGCCGAGG CTTCGCAACG CTTCGGCATT CCGGAGCGCT GGATTCGCGC CGTCATGCGT
GCCGAAAGCG CGGGCGACGT GCGCGCGATC TCATCCGCGG GCGCAATGGG TCTGATGCAG
ATCATGCCCC ATACATGGAC GGAGCTTCGC ACACGCCACC GACTGGGGCG CGATCCTTAC
AGTCCGCGCG ACAACATCCT CGCGGGCGCG GCCTACCTGC GCGAGATGTA TGATCGCTAT
GGTTCGCCAG GCTTCCTGGC CGCCTACAAT GCGGGGCCGG GACGCTACGA GGAGTATCTC
GCCGGTCGCC CGCTCCCGGC CGAGACCCGC GCCTACGTCG CCGCGCTGGT CCCTTTATTC
GGCGGCGGTG ATCTCCCCAG TCCAGTCGCC GTCGCCGTCG CCGATCCGCC ACAGGCTTGG
ACCCGCGCCC CGCTGTTCGT CGCGCGTATC GAGCGCATCT CGGCTGCCGA TCCAGCGCAA
ACCCCGCACC ATCCGGACGA CGCTCCTGCG ACACCTCCCG TGCGCGAGGT TTCCGCGATC
ATGCCGCAGT CCTCCGGCCT GTTCGTCGCG CGGCCTGATG GTCGAGGGCC GCAATGA
 
Protein sequence
MPTRRPSRRQ PVETGRTRAA RHLSVLLLSG LLIVSGSPAT ALAQNATTSR ASPADPFAVF 
IAEASQRFGI PERWIRAVMR AESAGDVRAI SSAGAMGLMQ IMPHTWTELR TRHRLGRDPY
SPRDNILAGA AYLREMYDRY GSPGFLAAYN AGPGRYEEYL AGRPLPAETR AYVAALVPLF
GGGDLPSPVA VAVADPPQAW TRAPLFVARI ERISAADPAQ TPHHPDDAPA TPPVREVSAI
MPQSSGLFVA RPDGRGPQ