Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_2832 |
Symbol | metH |
ID | 5423082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 3156033 |
End bp | 3159848 |
Gene Length | 3816 bp |
Protein Length | 1271 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640882086 |
Product | B12-dependent methionine synthase |
Protein accession | YP_001417729 |
Protein GI | 154246771 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.192266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTGTT TTCGTCCGGC GACGGACGTC CATCTGTTTC ACCGAGGCTG TCCCAAGCCC CGAGCCCTGA GAACTTCAGC CATGACCGAA ACCCGCGCCG CCGACACCTT CTCAGCCCTC GCCCAGGCCG CGTCCGAGCG CATTCTCGTG CTCGACGGCG CCATGGGCAC CATGATCCAG GGGCTGAAGC TGGACGAGGC CGGCTATCGG GGCGCGCGCT TTGCCGACTG GCCGCGCGAC GTGAAGGGCA ACAACGACCT TCTCAGCCTC ACCCAGCCCG ATGCGGTGCG GGCCATCCAC CTCGAATATT TCCGCGCCGG CGCGGACATG GTGGAAACCA ACACCTTCTC CGGCACCTCG ATCGCCCAGG CCGACTACGG CATGGAAGAG CTGGTCTACG AGCTGAATTT CGAGAGCGCC CGCCTCGCCC GGGAGGCAGG CGACATCGCC CAGGCCGAGG ACGGCCGCCC GCGTTTCGTC GCCGGCGCCT TCGGCCCCAC CAACCGCACC GCCTCCATCT CCCCGGACGT GAACGACCCC GGCTTCCGCG CGGTGACCTT CGACGACCTC GCCGGCGCCT ATCACGAGCA GGCGCGCGGT CTCGTCGATG GCGGGGCGGA CATCCTGCTG GTCGAGACCA TCTTCGATAC GCTGAACGCC AAGGCGGCCA TCTTCGCCAT CGAGCAATTG TTCGCCGAGC GCGGCATCCG CCTGCCGGTG ATGATCTCCG GCACCATCAC CGATCTCTCC GGCCGCACCC TGTCGGGCCA GACGCCCGCC GCCTTCTGGT ATTCGCTCCA GCATGCCCGG CCGTTCTCCA TCGGCCTCAA TTGCGCGCTG GGCGCGCGGG AGATGCGCGC CCACGTGGCC GAGATCGGCC GGGTGGCCGA CACGCTGGTG TGCGCCTATC CCAATGCCGG CCTGCCCAAC GAATTCGGCA TGTATGACGA GAGCCCGCAG GCCATGGCGG AACTGGTTGG CGAGTTCGCC GCCTCCGGCC TCGTGAACAT CGTGGGCGGC TGCTGCGGTA CCACGCCAGC CCACATCCGC GCCATCGCGG AAGCGGTGAA GGGCAAGGCC CCGCGCGTGG TGCCGCAGAT CGAGCCGCGC CTGCGCCTCT CCGGTCTTGA GCCGTTCGAG CTGACGCCGG AAATTCCCTT CGTGAACGTG GGCGAGCGCA CCAACGTCAC CGGCTCCGCC CGCTTCCGCA AGCTCATCAC CACCGGCGAC TTTGCCGCCG CGCTCGCGGT GGCGCGCGAC CAGGTGGAGA GCGGCGCGCA GGTCATCGAC ATCAACATGG ATGAAGGCCT CCTCGACAGC GAGGCGGCCA TGGTCACCTT CCTCAACCTC GTCGCCGCCG AGCCGGACAT CGCCAAGGTG CCGGTGATGG TGGACAGCTC GAAGTGGGAG ATCATCGAGC AGGGGCTGAA GCGGCTTCAG GGCAAGGGCA TCGTCAATTC CATCTCGATG AAGGAGGGGG AAGACGCCTT CCGCGAGAAG GCCCGGCTCG TGCGCAGCTA CGGCGCCGCC GTGGTGGTGA TGGCCTTCGA CGAGGAAGGC CAGGCCGACA CCTTCGAGCG CAAGACCCAG ATCTGCGCCC GCGCCTACCG TATCCTGACG GAAGAGCTGG CCTTCCCGCC GGAAGACATC ATCTTCGATC CCAACATCTT CGCGGTGGCC ACCGGCATCG AGGAGCACGC CGGCTATGGC GTCGCCTTCA TCGAGGCGAC CCGCTGGATC CGGCAGAACC TGCCCCACGC CCACGTGTCG GGCGGCGTCT CCAACCTGTC GTTCTCGTTC CGCGGCAACG AGCCGGTGCG CGAGGCCATG CACGCGGTTT TCCTCTATCA CGCCATCCAG GCGGGCATGG ACATGGGCAT CGTCAATGCC GGCCAGCTCG CCGTCTATGA CGAGATCGAG CCCGGACTGC GCGAGGCCTG CGAGGACGTG GTGCTGAACC GCCGTCCCGA TGCCACCGAG CGCCTTTTGG AGATCGCCGA GGGCTTCAAG GGCGCGGCCG GCAAGGAGAA GAAGGAGGCG GATCTCGCCT GGCGCTCCTG GCCAGTGGAC AAGCGCCTCG CCCATGCCCT CGTCAACGGC ATCACCGACT TCGTGGAGGC GGACACCGAG GAGGCGCGCC AGTCCGTCGC CCGCCCGCTC CACGTCATCG AGGGGCCGCT GATGGCGGGC ATGAATGTGG TGGGCGACCT GTTCGGCGCC GGCAAGATGT TCCTGCCCCA GGTGGTGAAG TCCGCCCGCG TGATGAAGCA GGCCGTAGCC TATCTCATGC CCTTCATGGA GAAGGAAAAG GAGGAGATGG GCGTCACCTC CGCCTCGGCC GCCGGCAAGG TGCTGATGGC CACCGTGAAG GGCGACGTGC ACGACATCGG CAAGAACATC GTGGGCGTCG TGCTCCAGTG CAACAACTAC GAGGTCATCG ATCTCGGCGT CATGGTGCCC ATGGCGAAGA TCCTCGAAAC CGCCAAGGCC GAGAAGGTGG ACGTGATCGG CCTTTCCGGC CTCATCACCC CGTCGCTGGA CGAGATGGTG AATGTGGCCG CCGAGATGGA GCGCGAGGGC TTTTCCCTGC CGCTGCTCAT CGGCGGCGCC ACCACCTCGC GCGTCCACAC CGCGGTGAAG ATCTCGCCCC GCTACGAGCG CGGGCAGGCG GTCTATGTCA CCGACGCCAG CCGGGCGGTG GGCGTGGTCT CCAGCCTGCT CAACAAGGAC ACGCGCGGCG CTTATGTGGC GGACATCCGC GCCGAATATC GCAAGCTTGC CGAGGCCCAT GCGCGGGCCG ATGCCAACAA GCAGCGCGTG CCCCTCGCCA AGGCGCGCGA CAACGCCCTG AAGCTGGACT TTTCCGCTTA TGAGGTGCCC CGGCCTGGCT TCCTCGGAAC CCAGATGATC GAGGACCACG ACCTCGCCGA CCTCGTGCCC TTCATCGACT GGACGCCCTT CTTCCAGTCC TGGGAGCTGA CCGGGCGCTA TCCGGCCATC CTTGAAGACC AGGTGGTGGG CGAGCCGGCC CGCGCCCTGT TCGCCGACGC GCAGGCGATG CTGGAGAAGA TGGTTGCGGA GAAGTGGGTG AGCGCCCGTG CCGTGGTGGG CTTCTGGCCG GCCAATGCCA TGGGCGACGA CATCGTCCTG TTCCGCGACG ACACCCGCAA GACGCCGCTT GCCACCCTCC ACACCCTGCG CCAGCAACTG GCGAAGCGGG ACGGGCGCTT CAACCTGGCG CTGTCGGACT TCGTCGCGCC GCTCGAGACC GGGGTCGCCG ATTATGTCGG CGGCTTCGCG GTGACCACCG GCATCGGCGA GGAGGAGCGG GTGGCGGCCT TCAAGGCGGC CAACGACGAC TATTCCGCCA TCCTGCTGAA GGCCCTGTGC GACCGCCTCG CCGAGGCCTT CGCCGAGCGC CTGCATCATC TGGTGCGGAC CCGGCTGTGG GGCTATGCGG CCGACGAGGC GCTGGCCAAC GACGACCTCA TCGCCGAGCG CTATCGCGGC ATCCGCCCCG CGCCCGGCTA TCCGGCCCAG CCCGACCACA CGGAAAAGGC GACCATCTTC CGCCTGCTCG ACGCCACCCA CAAGGCGGGC ATCCAGCTGA CGGAGAGCTT CGCCATGTGG CCGGGGGCGG CGGTGTCGGG GCTGTATTTC GCCCACCCCG AGAGCGCCTA TTTCGGCGTC GGCCGCATCG AGCGCGACCA GGTGGAGGAC TATGCCGCCC GCAAGGGCTG GAGCGTGGAG GAGGCCGAGA AGTGGCTCGC CCCCATCCTC AATTACGATC CCGCGCAGGT GGCCGCGGCG GAGTAG
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Protein sequence | MSCFRPATDV HLFHRGCPKP RALRTSAMTE TRAADTFSAL AQAASERILV LDGAMGTMIQ GLKLDEAGYR GARFADWPRD VKGNNDLLSL TQPDAVRAIH LEYFRAGADM VETNTFSGTS IAQADYGMEE LVYELNFESA RLAREAGDIA QAEDGRPRFV AGAFGPTNRT ASISPDVNDP GFRAVTFDDL AGAYHEQARG LVDGGADILL VETIFDTLNA KAAIFAIEQL FAERGIRLPV MISGTITDLS GRTLSGQTPA AFWYSLQHAR PFSIGLNCAL GAREMRAHVA EIGRVADTLV CAYPNAGLPN EFGMYDESPQ AMAELVGEFA ASGLVNIVGG CCGTTPAHIR AIAEAVKGKA PRVVPQIEPR LRLSGLEPFE LTPEIPFVNV GERTNVTGSA RFRKLITTGD FAAALAVARD QVESGAQVID INMDEGLLDS EAAMVTFLNL VAAEPDIAKV PVMVDSSKWE IIEQGLKRLQ GKGIVNSISM KEGEDAFREK ARLVRSYGAA VVVMAFDEEG QADTFERKTQ ICARAYRILT EELAFPPEDI IFDPNIFAVA TGIEEHAGYG VAFIEATRWI RQNLPHAHVS GGVSNLSFSF RGNEPVREAM HAVFLYHAIQ AGMDMGIVNA GQLAVYDEIE PGLREACEDV VLNRRPDATE RLLEIAEGFK GAAGKEKKEA DLAWRSWPVD KRLAHALVNG ITDFVEADTE EARQSVARPL HVIEGPLMAG MNVVGDLFGA GKMFLPQVVK SARVMKQAVA YLMPFMEKEK EEMGVTSASA AGKVLMATVK GDVHDIGKNI VGVVLQCNNY EVIDLGVMVP MAKILETAKA EKVDVIGLSG LITPSLDEMV NVAAEMEREG FSLPLLIGGA TTSRVHTAVK ISPRYERGQA VYVTDASRAV GVVSSLLNKD TRGAYVADIR AEYRKLAEAH ARADANKQRV PLAKARDNAL KLDFSAYEVP RPGFLGTQMI EDHDLADLVP FIDWTPFFQS WELTGRYPAI LEDQVVGEPA RALFADAQAM LEKMVAEKWV SARAVVGFWP ANAMGDDIVL FRDDTRKTPL ATLHTLRQQL AKRDGRFNLA LSDFVAPLET GVADYVGGFA VTTGIGEEER VAAFKAANDD YSAILLKALC DRLAEAFAER LHHLVRTRLW GYAADEALAN DDLIAERYRG IRPAPGYPAQ PDHTEKATIF RLLDATHKAG IQLTESFAMW PGAAVSGLYF AHPESAYFGV GRIERDQVED YAARKGWSVE EAEKWLAPIL NYDPAQVAAA E
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