Gene Xaut_2832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2832 
SymbolmetH 
ID5423082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3156033 
End bp3159848 
Gene Length3816 bp 
Protein Length1271 aa 
Translation table11 
GC content68% 
IMG OID640882086 
ProductB12-dependent methionine synthase 
Protein accessionYP_001417729 
Protein GI154246771 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.192266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGTT TTCGTCCGGC GACGGACGTC CATCTGTTTC ACCGAGGCTG TCCCAAGCCC 
CGAGCCCTGA GAACTTCAGC CATGACCGAA ACCCGCGCCG CCGACACCTT CTCAGCCCTC
GCCCAGGCCG CGTCCGAGCG CATTCTCGTG CTCGACGGCG CCATGGGCAC CATGATCCAG
GGGCTGAAGC TGGACGAGGC CGGCTATCGG GGCGCGCGCT TTGCCGACTG GCCGCGCGAC
GTGAAGGGCA ACAACGACCT TCTCAGCCTC ACCCAGCCCG ATGCGGTGCG GGCCATCCAC
CTCGAATATT TCCGCGCCGG CGCGGACATG GTGGAAACCA ACACCTTCTC CGGCACCTCG
ATCGCCCAGG CCGACTACGG CATGGAAGAG CTGGTCTACG AGCTGAATTT CGAGAGCGCC
CGCCTCGCCC GGGAGGCAGG CGACATCGCC CAGGCCGAGG ACGGCCGCCC GCGTTTCGTC
GCCGGCGCCT TCGGCCCCAC CAACCGCACC GCCTCCATCT CCCCGGACGT GAACGACCCC
GGCTTCCGCG CGGTGACCTT CGACGACCTC GCCGGCGCCT ATCACGAGCA GGCGCGCGGT
CTCGTCGATG GCGGGGCGGA CATCCTGCTG GTCGAGACCA TCTTCGATAC GCTGAACGCC
AAGGCGGCCA TCTTCGCCAT CGAGCAATTG TTCGCCGAGC GCGGCATCCG CCTGCCGGTG
ATGATCTCCG GCACCATCAC CGATCTCTCC GGCCGCACCC TGTCGGGCCA GACGCCCGCC
GCCTTCTGGT ATTCGCTCCA GCATGCCCGG CCGTTCTCCA TCGGCCTCAA TTGCGCGCTG
GGCGCGCGGG AGATGCGCGC CCACGTGGCC GAGATCGGCC GGGTGGCCGA CACGCTGGTG
TGCGCCTATC CCAATGCCGG CCTGCCCAAC GAATTCGGCA TGTATGACGA GAGCCCGCAG
GCCATGGCGG AACTGGTTGG CGAGTTCGCC GCCTCCGGCC TCGTGAACAT CGTGGGCGGC
TGCTGCGGTA CCACGCCAGC CCACATCCGC GCCATCGCGG AAGCGGTGAA GGGCAAGGCC
CCGCGCGTGG TGCCGCAGAT CGAGCCGCGC CTGCGCCTCT CCGGTCTTGA GCCGTTCGAG
CTGACGCCGG AAATTCCCTT CGTGAACGTG GGCGAGCGCA CCAACGTCAC CGGCTCCGCC
CGCTTCCGCA AGCTCATCAC CACCGGCGAC TTTGCCGCCG CGCTCGCGGT GGCGCGCGAC
CAGGTGGAGA GCGGCGCGCA GGTCATCGAC ATCAACATGG ATGAAGGCCT CCTCGACAGC
GAGGCGGCCA TGGTCACCTT CCTCAACCTC GTCGCCGCCG AGCCGGACAT CGCCAAGGTG
CCGGTGATGG TGGACAGCTC GAAGTGGGAG ATCATCGAGC AGGGGCTGAA GCGGCTTCAG
GGCAAGGGCA TCGTCAATTC CATCTCGATG AAGGAGGGGG AAGACGCCTT CCGCGAGAAG
GCCCGGCTCG TGCGCAGCTA CGGCGCCGCC GTGGTGGTGA TGGCCTTCGA CGAGGAAGGC
CAGGCCGACA CCTTCGAGCG CAAGACCCAG ATCTGCGCCC GCGCCTACCG TATCCTGACG
GAAGAGCTGG CCTTCCCGCC GGAAGACATC ATCTTCGATC CCAACATCTT CGCGGTGGCC
ACCGGCATCG AGGAGCACGC CGGCTATGGC GTCGCCTTCA TCGAGGCGAC CCGCTGGATC
CGGCAGAACC TGCCCCACGC CCACGTGTCG GGCGGCGTCT CCAACCTGTC GTTCTCGTTC
CGCGGCAACG AGCCGGTGCG CGAGGCCATG CACGCGGTTT TCCTCTATCA CGCCATCCAG
GCGGGCATGG ACATGGGCAT CGTCAATGCC GGCCAGCTCG CCGTCTATGA CGAGATCGAG
CCCGGACTGC GCGAGGCCTG CGAGGACGTG GTGCTGAACC GCCGTCCCGA TGCCACCGAG
CGCCTTTTGG AGATCGCCGA GGGCTTCAAG GGCGCGGCCG GCAAGGAGAA GAAGGAGGCG
GATCTCGCCT GGCGCTCCTG GCCAGTGGAC AAGCGCCTCG CCCATGCCCT CGTCAACGGC
ATCACCGACT TCGTGGAGGC GGACACCGAG GAGGCGCGCC AGTCCGTCGC CCGCCCGCTC
CACGTCATCG AGGGGCCGCT GATGGCGGGC ATGAATGTGG TGGGCGACCT GTTCGGCGCC
GGCAAGATGT TCCTGCCCCA GGTGGTGAAG TCCGCCCGCG TGATGAAGCA GGCCGTAGCC
TATCTCATGC CCTTCATGGA GAAGGAAAAG GAGGAGATGG GCGTCACCTC CGCCTCGGCC
GCCGGCAAGG TGCTGATGGC CACCGTGAAG GGCGACGTGC ACGACATCGG CAAGAACATC
GTGGGCGTCG TGCTCCAGTG CAACAACTAC GAGGTCATCG ATCTCGGCGT CATGGTGCCC
ATGGCGAAGA TCCTCGAAAC CGCCAAGGCC GAGAAGGTGG ACGTGATCGG CCTTTCCGGC
CTCATCACCC CGTCGCTGGA CGAGATGGTG AATGTGGCCG CCGAGATGGA GCGCGAGGGC
TTTTCCCTGC CGCTGCTCAT CGGCGGCGCC ACCACCTCGC GCGTCCACAC CGCGGTGAAG
ATCTCGCCCC GCTACGAGCG CGGGCAGGCG GTCTATGTCA CCGACGCCAG CCGGGCGGTG
GGCGTGGTCT CCAGCCTGCT CAACAAGGAC ACGCGCGGCG CTTATGTGGC GGACATCCGC
GCCGAATATC GCAAGCTTGC CGAGGCCCAT GCGCGGGCCG ATGCCAACAA GCAGCGCGTG
CCCCTCGCCA AGGCGCGCGA CAACGCCCTG AAGCTGGACT TTTCCGCTTA TGAGGTGCCC
CGGCCTGGCT TCCTCGGAAC CCAGATGATC GAGGACCACG ACCTCGCCGA CCTCGTGCCC
TTCATCGACT GGACGCCCTT CTTCCAGTCC TGGGAGCTGA CCGGGCGCTA TCCGGCCATC
CTTGAAGACC AGGTGGTGGG CGAGCCGGCC CGCGCCCTGT TCGCCGACGC GCAGGCGATG
CTGGAGAAGA TGGTTGCGGA GAAGTGGGTG AGCGCCCGTG CCGTGGTGGG CTTCTGGCCG
GCCAATGCCA TGGGCGACGA CATCGTCCTG TTCCGCGACG ACACCCGCAA GACGCCGCTT
GCCACCCTCC ACACCCTGCG CCAGCAACTG GCGAAGCGGG ACGGGCGCTT CAACCTGGCG
CTGTCGGACT TCGTCGCGCC GCTCGAGACC GGGGTCGCCG ATTATGTCGG CGGCTTCGCG
GTGACCACCG GCATCGGCGA GGAGGAGCGG GTGGCGGCCT TCAAGGCGGC CAACGACGAC
TATTCCGCCA TCCTGCTGAA GGCCCTGTGC GACCGCCTCG CCGAGGCCTT CGCCGAGCGC
CTGCATCATC TGGTGCGGAC CCGGCTGTGG GGCTATGCGG CCGACGAGGC GCTGGCCAAC
GACGACCTCA TCGCCGAGCG CTATCGCGGC ATCCGCCCCG CGCCCGGCTA TCCGGCCCAG
CCCGACCACA CGGAAAAGGC GACCATCTTC CGCCTGCTCG ACGCCACCCA CAAGGCGGGC
ATCCAGCTGA CGGAGAGCTT CGCCATGTGG CCGGGGGCGG CGGTGTCGGG GCTGTATTTC
GCCCACCCCG AGAGCGCCTA TTTCGGCGTC GGCCGCATCG AGCGCGACCA GGTGGAGGAC
TATGCCGCCC GCAAGGGCTG GAGCGTGGAG GAGGCCGAGA AGTGGCTCGC CCCCATCCTC
AATTACGATC CCGCGCAGGT GGCCGCGGCG GAGTAG
 
Protein sequence
MSCFRPATDV HLFHRGCPKP RALRTSAMTE TRAADTFSAL AQAASERILV LDGAMGTMIQ 
GLKLDEAGYR GARFADWPRD VKGNNDLLSL TQPDAVRAIH LEYFRAGADM VETNTFSGTS
IAQADYGMEE LVYELNFESA RLAREAGDIA QAEDGRPRFV AGAFGPTNRT ASISPDVNDP
GFRAVTFDDL AGAYHEQARG LVDGGADILL VETIFDTLNA KAAIFAIEQL FAERGIRLPV
MISGTITDLS GRTLSGQTPA AFWYSLQHAR PFSIGLNCAL GAREMRAHVA EIGRVADTLV
CAYPNAGLPN EFGMYDESPQ AMAELVGEFA ASGLVNIVGG CCGTTPAHIR AIAEAVKGKA
PRVVPQIEPR LRLSGLEPFE LTPEIPFVNV GERTNVTGSA RFRKLITTGD FAAALAVARD
QVESGAQVID INMDEGLLDS EAAMVTFLNL VAAEPDIAKV PVMVDSSKWE IIEQGLKRLQ
GKGIVNSISM KEGEDAFREK ARLVRSYGAA VVVMAFDEEG QADTFERKTQ ICARAYRILT
EELAFPPEDI IFDPNIFAVA TGIEEHAGYG VAFIEATRWI RQNLPHAHVS GGVSNLSFSF
RGNEPVREAM HAVFLYHAIQ AGMDMGIVNA GQLAVYDEIE PGLREACEDV VLNRRPDATE
RLLEIAEGFK GAAGKEKKEA DLAWRSWPVD KRLAHALVNG ITDFVEADTE EARQSVARPL
HVIEGPLMAG MNVVGDLFGA GKMFLPQVVK SARVMKQAVA YLMPFMEKEK EEMGVTSASA
AGKVLMATVK GDVHDIGKNI VGVVLQCNNY EVIDLGVMVP MAKILETAKA EKVDVIGLSG
LITPSLDEMV NVAAEMEREG FSLPLLIGGA TTSRVHTAVK ISPRYERGQA VYVTDASRAV
GVVSSLLNKD TRGAYVADIR AEYRKLAEAH ARADANKQRV PLAKARDNAL KLDFSAYEVP
RPGFLGTQMI EDHDLADLVP FIDWTPFFQS WELTGRYPAI LEDQVVGEPA RALFADAQAM
LEKMVAEKWV SARAVVGFWP ANAMGDDIVL FRDDTRKTPL ATLHTLRQQL AKRDGRFNLA
LSDFVAPLET GVADYVGGFA VTTGIGEEER VAAFKAANDD YSAILLKALC DRLAEAFAER
LHHLVRTRLW GYAADEALAN DDLIAERYRG IRPAPGYPAQ PDHTEKATIF RLLDATHKAG
IQLTESFAMW PGAAVSGLYF AHPESAYFGV GRIERDQVED YAARKGWSVE EAEKWLAPIL
NYDPAQVAAA E