| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2451 |
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| Symbol | |
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| ID | 5424248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2737595 |
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| End bp | 2739139 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640881704 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001417350 |
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| Protein GI | 154246392 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.628376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCCA TGACGCATCG GGTGTTGGCG CGGGTTCGGG CGCAGGTTCC GACGCGGATT
CTGGCACGGG TGGCGGCCGG GCCGCTGGCG GCGCTGGTGC TGTCGGGCTG CGCCGTGGGG
CCGGGCTACG AGACACCGCA ACTCGCCATG CCCGACCACT GGAGCAGCGG GCGCGGCGCG
AGGGCGGAGG TCGCGCCGCA GCTCCAGCGC TGGTGGCGAC GGCTGGGCGA TGGCGTGCTC
GACGGGCTGA TGGAGGAAGC GGTGGCCGGC AATCTCGACG TGGCGACTGC CAAGGCCAAG
GTGCGTGCGG CCCGTGCCAC CTATCGCGAG CAGGTGGGCG CCCTGTTTCC GCAGGTCACC
GGCAACGCCT CCGCCACACG GGGCGACAAT GGCGGCAACG TGGGGTCGGG GGGCGATGTC
ACCGTCGCCA GCACCTATGG CCAGTATCAG GCGGGGCTCG ACGCCAGCTG GGAAATCGAC
CTGTTCGGCG CCAACCGCCG GGGCGTGGAG GCCGCTGCCT ACGGCTCGGA TGCAGCGGTG
GACGATCTCG ACGCCGCCCT CGTCACCCTC GTGGGCGACG TGGCCACCAA TTATATCGAC
GCGCGCGGAT ATCAGGCGCG CATCGCGCTC GCCCGCCGCA CCGCGAGCGC CCAGCGCGAG
ACCGCCGCGC TGACCAGGCG CAAGCTCGAC GCCGGCGGCG CCTCTGCTCT GGATGCCGCC
AATGCGGCCG GGCAGGCGGC CAGTACCGAG GCGGACATTC CAGAGCTTGA AGCGGCCTAT
GCCCAGAGCG TGCATCGCCT GTCCGTGCTC ACGGGGCGGG AGCCGGCGGC GCTCACCGGA
CGGTTGGAGC GTCCGCGCGC GGTACCGGCG CCGCGCCTGC CGGTGCCCAA GGGCATTCCA
GCGCAGGTGC TCACCGCCCG CCCGGACGTG CGCGCCGCCG AGCGGCGGCT GGGCCAGTCC
ACGGCGCTGG TGGGGCAGGC GACGGCCAAC CGCTATCCCT CCATCAGCCT CGCCGGCACG
CTCAACACCA CCGGAACGCA ACTGGGGGAT CTGGCGCGCG GCTCCTCCAT CAGCTGGTCG
TTCGGGCCGA CACTGACGGT GCCGATCTTC ACCGGCGGGC AGCTCAAGGC GGCGCAGGAA
CTGGCGGAGG CAGAGCGCGA CCAGTCGTTC CTCGCCTATC GCGCGGCGGT GCTCACCGCG
CTGGAGGATG TGGAGAATGC CTCCGTCTCC CTCGGCAAGC AGCGCCTGAA GGCCGGCCGG
CTCGCCGCCT CCGCCGCCTC CTACCGCGAG GCGGGGCGGC TCTCCCACGC GCTCTATGGG
GCGGGCTCGT CGAGCTTCCT CGACGTGCTC ACCGCCGAGC GCTCGCTCTA TGCGGCCGAG
ACGGCGCTGA TCGAGAGCCG GGTGGCGGTG GCGACCTATT ATGTGGCGCT CAACAAGGCG
CTGGGCGGCG GCTGGGACGG GGCGGTGGAC ACGACCACGC CGGTGGTCGT GGACGACAAT
ACCGGCCCCC ATTTCGCGCG CCTGCCGGCG TCGGCAATCC AGTGA
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| Protein sequence | MASMTHRVLA RVRAQVPTRI LARVAAGPLA ALVLSGCAVG PGYETPQLAM PDHWSSGRGA
RAEVAPQLQR WWRRLGDGVL DGLMEEAVAG NLDVATAKAK VRAARATYRE QVGALFPQVT
GNASATRGDN GGNVGSGGDV TVASTYGQYQ AGLDASWEID LFGANRRGVE AAAYGSDAAV
DDLDAALVTL VGDVATNYID ARGYQARIAL ARRTASAQRE TAALTRRKLD AGGASALDAA
NAAGQAASTE ADIPELEAAY AQSVHRLSVL TGREPAALTG RLERPRAVPA PRLPVPKGIP
AQVLTARPDV RAAERRLGQS TALVGQATAN RYPSISLAGT LNTTGTQLGD LARGSSISWS
FGPTLTVPIF TGGQLKAAQE LAEAERDQSF LAYRAAVLTA LEDVENASVS LGKQRLKAGR
LAASAASYRE AGRLSHALYG AGSSSFLDVL TAERSLYAAE TALIESRVAV ATYYVALNKA
LGGGWDGAVD TTTPVVVDDN TGPHFARLPA SAIQ
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