| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2377 |
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| Symbol | |
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| ID | 5422868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2653968 |
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| End bp | 2656970 |
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| Gene Length | 3003 bp |
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| Protein Length | 1000 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640881631 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001417277 |
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| Protein GI | 154246319 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0421438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCCT CCCCCCGCCC GCTTCAGCCC GGCGACCATG TGTTCCTGGT GGACGGCTCG
TCCTTCGTGT TCCGCGCCTA TTTCCAGTCC ATCAACCAGG ACCGAAAGTA CAATTTCCGC
TCCGACCGGC TGCCCACCGG GGCGGTGCGG CTGTTCTGCA CCAAGCTGCT GCAATTCGTG
CGCGACGGGG CGGTGGGCAT CAAGCCGACC CACCTCGCCA TCATCTTCGA CAAGTCGGAG
GATAGTTTCC GCAAGGAGCT TTACCCCGAC TACAAGGCCA ACCGCTCCGA GCCGCCCGAG
GAACTCATTC CCCAGTTCCC GCTCATGCGC GAGGCGGTGC GCGCCTTCGG CCTCATTCCG
GTGGAGCAGG CGCGCTACGA GGCGGACGAC CTCATCGCCA CCTATGCCGA CCAGGCGGTG
AAGGCGGGGG CGGACGTGCT CATCGTCTCC GCCGACAAGG ATCTGATGCA GATGGTCGGC
CCCAAGGTCG CCATGTACGA CCCTGCTTCC GGCGAGAGCG GCGGGCGCGG GGCGCGGCCG
GAGCGGCGCA TCGGGGTGGG CGAGGTGCTC GAATATTTCG GCGTGCCGCC GGAGAAGGTC
ACCGACGTGC AGGCGCTGGC GGGGGATTCC ACCGACAACG TGCCCGGCGT GCCCGGCATC
GGCATCAAGA CCGCCGCCCA GCTCATTGGC GAATACGGCG ACCTTGAAAC CCTGCTGGCC
CGCGCCGGCG AGATCAAGCA GCCCAAGCGG CGCGAATCGC TGCTCACCAA TGCCGAGGCG
GCGCGCATCT CCAAGACGCT GGTCACGCTG GTGCGCGACG TGTCCGTGGA GGTGCCGCTG
GAGGACCTGG TGCTGGAGGC GCCCGACGCG AAGCGCCTCA TCGCCTTCCT GAAGGCCATG
GAATTCACCA CCATCACCCG CCGCGTGGCC GAGGCCTATG GCGTGGAGGC CGCCGAGGTG
GAGGCCGACC CCAGGCTCGC CCCCGCCGGC CTGTTCTCCC CCGCCGCCCC CACCTCGGCC
GAGGAGACGG ACGGCGCAGA GCCGGCCACG GGTGGGGAAG CGCCCGCGGT CTCGGCCGTG
GCGCAGGCCA TGGACGGCAC GCTCACCCCG TCCGACCTCG CCCATGCCCG CGCCAGCACG
GCACGCACCA TCCCCGTGGA CCGCACGGCC TACCGCACCG TCCTCGACCT CGCCGAGCTG
AAGGCATGGT GCGCCAAGGC GCAGGACCAG GGGTTGCTTG CCTTCGACAC CGAGACCAAT
TCCCTCGATC CCATGCAGGC GGACCTGGTG GGCGTCTCGC TCGCGCTGTC GCCCAACGAG
GCCTGCTATA TCCCCCTTGC CCATACCGGA GCCGGCGACG GGCTATTCAG CGAGGGGCAG
CTTCCCGGCC AGATCCCGGT CCGCGATGCC ATCGCCGCGC TGAAGGGTGT GCTGGAGGAC
AAGGGCACCC TGAAGGTCGG GCACAATGTG AAGTACGACC AGTTGGTGCT GGCCCGCCAC
GGCATAGATG TCGCCCCGTT CGACTGCACC ATGTGCATGT CCTACGCGCT GGACGCAGGC
AAGAACGGCC ATGGCATGGA CGAATTGTCG GTGCTCCATC TCGGCCACCA GCCCATCGCA
TTCTCGGAAG TGACCGGCAA GGGCAAGGGA AAGGTGACCT TCGACAAGGT CGCGCTGGAG
CCCGCCACCC ACTATGCCGC CGAGGATGCG GACGTGACCC TGCGCCTGTG GCAGGTGCTG
AAGCCCCGCC TCGCCGCCGA GGGCCGCACC ACCGTCTACG AGACTTTGGA GCGCCCGCTC
ATCGCCGTGC TGGCGCGCAT GGAGAGCCGG GGCATCTCCA TCGACAAGGC CATGCTGGCG
CGCCTCTCCT CAGAGTTCGC ACAAGGCGCG GCGCGCATCG AGGACGAGAT CGCGGAGCTG
GCCGGCGAGC GGCTGAACGT GGGCAGCCCC AAGCAGATGG GCGACATCCT GTTCGGCAAG
ATGGGCCTGC CCGGCGGCAC CAAGACCGCC ACCGGCATGT GGTCCACCAA GGCCACCGCG
CTGGAGGAGC TGGCCGAGGC CGGCCACAAG CTGCCGCAGA AGATCCTGGA ATGGCGCCAG
CTCTCCAAGC TGCGCTCCAC CTATACGGAC GCCCTGCCCA ACTTCGTGAA CCCCCAGACC
AGGCGGGTCC ACACCTCCTA TGCGCTGGCC GCCACCACCA CCGGGCGGCT GTCCTCTTCC
GACCCGAACC TGCAGAACAT CCCCATCCGC ACCGAGGAAG GCCGGCGCAT CCGCCGCGCG
TTCGTGGCGG AAGAAGGCAA CCTTCTGGTT TCAGCGGACT ATTCGCAGAT CGAGCTGCGG
CTCCTCGCCG AGATCGCCGA GATCCCGGCC CTGCGCACCG CCTTCACCGA GGGGCTGGAC
ATCCACGCCA TGACCGCCTC CGAGATGTTC AACGTGCCGG TGAAGGACAT GCCCGCCGAG
GTGCGCCGGC GCGCCAAGGC CATCAATTTC GGCATCATCT ACGGCATCTC CGCCTTCGGC
CTCGCCAACC AGCTGGGCAT TCCGCGCGAG GAGGCGGGGC AATACATCAA GCGCTATTTC
GAGCGCTTCC CCGGCATCCG CGACTATATG GAGGAGACCA AGACCTTCTG TCGCGAGCAC
GGCTATGTGG AGACCCTGTT CGGCCGGCGC TGCCACTATC CCGAGATCGC GGCCAAGAAC
CCCTCCATCC GCGCCTTCAA CGAGCGCGCC GCCATCAATG CCCGCCTGCA AGGCACGGCG
GCGGACATCA TCCGCCGCGC CATGATCCGC ATGGAGCCGG CGCTGGAGAA GGCGAAGCTA
TCCGCGCGCA TGCTGCTGCA GGTGCACGAC GAACTGGTGT TCGAGGTGCC CGAGGGCGAG
GCGGACGCCA CCATCCCCGT GGTGCGCCAG TGCATGGAAA CCGCCTCCGC CCCCGCCGTC
GCTCTCGCCG TGCCGCTGAA GGTGGATGCG CGGGCGGCGA AGAACTGGGA AGAGGCGCAC
TGA
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| Protein sequence | MSPSPRPLQP GDHVFLVDGS SFVFRAYFQS INQDRKYNFR SDRLPTGAVR LFCTKLLQFV
RDGAVGIKPT HLAIIFDKSE DSFRKELYPD YKANRSEPPE ELIPQFPLMR EAVRAFGLIP
VEQARYEADD LIATYADQAV KAGADVLIVS ADKDLMQMVG PKVAMYDPAS GESGGRGARP
ERRIGVGEVL EYFGVPPEKV TDVQALAGDS TDNVPGVPGI GIKTAAQLIG EYGDLETLLA
RAGEIKQPKR RESLLTNAEA ARISKTLVTL VRDVSVEVPL EDLVLEAPDA KRLIAFLKAM
EFTTITRRVA EAYGVEAAEV EADPRLAPAG LFSPAAPTSA EETDGAEPAT GGEAPAVSAV
AQAMDGTLTP SDLAHARAST ARTIPVDRTA YRTVLDLAEL KAWCAKAQDQ GLLAFDTETN
SLDPMQADLV GVSLALSPNE ACYIPLAHTG AGDGLFSEGQ LPGQIPVRDA IAALKGVLED
KGTLKVGHNV KYDQLVLARH GIDVAPFDCT MCMSYALDAG KNGHGMDELS VLHLGHQPIA
FSEVTGKGKG KVTFDKVALE PATHYAAEDA DVTLRLWQVL KPRLAAEGRT TVYETLERPL
IAVLARMESR GISIDKAMLA RLSSEFAQGA ARIEDEIAEL AGERLNVGSP KQMGDILFGK
MGLPGGTKTA TGMWSTKATA LEELAEAGHK LPQKILEWRQ LSKLRSTYTD ALPNFVNPQT
RRVHTSYALA ATTTGRLSSS DPNLQNIPIR TEEGRRIRRA FVAEEGNLLV SADYSQIELR
LLAEIAEIPA LRTAFTEGLD IHAMTASEMF NVPVKDMPAE VRRRAKAINF GIIYGISAFG
LANQLGIPRE EAGQYIKRYF ERFPGIRDYM EETKTFCREH GYVETLFGRR CHYPEIAAKN
PSIRAFNERA AINARLQGTA ADIIRRAMIR MEPALEKAKL SARMLLQVHD ELVFEVPEGE
ADATIPVVRQ CMETASAPAV ALAVPLKVDA RAAKNWEEAH
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