| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2244 |
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| Symbol | |
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| ID | 5424043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2504430 |
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| End bp | 2506034 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640881497 |
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| Product | nuclease |
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| Protein accession | YP_001417144 |
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| Protein GI | 154246186 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000544674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0168792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTCA AAACAGTTCG CCTGGACAAT AGCTCATATC GACGAGGCGT GGTGCTTGGC
CTAACCATGG CGGAGATCAT GCTGCTTCTC GTCTTTTGCC TCCTTCTCGG CTTCGCAGCC
CTTACGGCAA GGGATCGGGA CAGGATCACG AAGCTGGCTC AGGAGCGCGA TGCCGCCCGT
AGTTCGGTGA TGGAGGAGTC CGCCCTGAAA CAGCTCGTGG CGGATCTGCG AAATATTGCA
GGCAACAAGG ACCAGGTATC GGATGCCTGG GAAACGCTTG TGCGCTCGCG CGATGCTATG
CAGAGGCTGG AACAGGCTGG GATTTCGGTC GACAATGCCA TTCACTCGGC GCGGGCAATT
ACCGCGTTCG CCAAAGCCGG ACTGGAGAGT GGAGATCCCG ACGAACTCGT CCGTGACGTC
AAACTTGCCC GGCAGATCAA GGGAGCGCTG AACGACCGAA ACCTAAGCAT TCCGAGCCCT
ACGGAAATGG CGAGCGCTGT GCAGAACGCT GCCAATGGAA AGGGCGAGCA TGATTGGCCG
CCTATCGTGA ATCTGAGCGA GGCGGATGGC TTTTTCTTCA AAGTGGGATC AGCTCAGCCG
AACCCGGATT TCGTGAAGAG CATCCATTCG TCGATCGCCC CACGTTTGAT CGATTATATC
AAGGAATACA ACGTCGATAT TGTTGAAGTG ATCGGTCATA CGGATGAGCA GCCTATGGCT
CCGCGTCCGT CAAATCTCGA TGGCGCGCTG CTGACGGTGC TGGCCAGCCG ATCCGACATA
TCGACGGCTA TGCCGGCGGA CAATGCTGGG CTTGGCCTCG CCCGCGCGGT GGCGGTAATG
CAGATCCTGA AAGGCGACAG CCGTCTCGCC GGCACGACAA TCCTTCCCTT CTCGGGAGGA
CAGCTTATCC AGCCGGGCGA TCGTCTGACA GCCGGAAGCG GGGGTGATGT CAAGGAGAGG
CGGCGCATAG AAATCCGGCT ACGTCGCTCA AATCCGATGC CTGATGTTAG CGGCCACGCT
ATTGCAGCGT CATCACCGGC CGCACCGCAA GACGCAACCA AAGGTAACGT CAAAGCCGGC
AATCCGGCCG CTCCACCGTT GGCTGAGACC AGGGCGGAGA CTGCCGCCTC CCTGGTGCCG
GCCCATCAGA TCGCTTCGGC GCAACCTGCT CCTCCATTAC CGGAATCCCT TGTCGGTCGC
GCCACCGTTA TCGACGGCGA TACGATCAGT ATCGGCGATC AAAGGATAAG GCTTTTTGGC
ATAGATGCCC CGGAAGCCCA GCAAACTTGC GTTGACGGCA AAGGGCAGGA CTATCCTTGC
GGTAGGAGCG CTGCGCTTGC TCTTAACGAG TTTCTTTCGG CGGCTCGCCC TACGCGTTGT
GATCGTAAAG GCATCGACCG ATACGGAAGA ATCGTTGCAA GCTGCTATCG TGCTTCTGGC
GAGGATATCG CGTCATGGCT GGTCCGGTCT GGCTTCGCAT TAGACTGGCA GTTATATAGC
CATGGCCTGT ACGCGAAAGA ACAGCAAAGC GCGCGCACAA ATCGGGCCGG GCTCTGGCAG
GGCCAATTCA CTCTTCCATG GGAGTGGCGG GCGAGCGGGA GATAA
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| Protein sequence | MTFKTVRLDN SSYRRGVVLG LTMAEIMLLL VFCLLLGFAA LTARDRDRIT KLAQERDAAR
SSVMEESALK QLVADLRNIA GNKDQVSDAW ETLVRSRDAM QRLEQAGISV DNAIHSARAI
TAFAKAGLES GDPDELVRDV KLARQIKGAL NDRNLSIPSP TEMASAVQNA ANGKGEHDWP
PIVNLSEADG FFFKVGSAQP NPDFVKSIHS SIAPRLIDYI KEYNVDIVEV IGHTDEQPMA
PRPSNLDGAL LTVLASRSDI STAMPADNAG LGLARAVAVM QILKGDSRLA GTTILPFSGG
QLIQPGDRLT AGSGGDVKER RRIEIRLRRS NPMPDVSGHA IAASSPAAPQ DATKGNVKAG
NPAAPPLAET RAETAASLVP AHQIASAQPA PPLPESLVGR ATVIDGDTIS IGDQRIRLFG
IDAPEAQQTC VDGKGQDYPC GRSAALALNE FLSAARPTRC DRKGIDRYGR IVASCYRASG
EDIASWLVRS GFALDWQLYS HGLYAKEQQS ARTNRAGLWQ GQFTLPWEWR ASGR
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